Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1790 |
Symbol | |
ID | 3972055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1944189 |
End bp | 1944701 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924903 |
Product | hypothetical protein |
Protein accession | YP_531668 |
Protein GI | 90423298 |
COG category | [S] Function unknown |
COG ID | [COG2983] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0377386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CCGCCAAAAA GCCCTCCGCG CAGGAGGGAT TGTTCTGGAA AACCAAGACA TTGGAACAGA TGTCGGGGCC CGAATGGGAG AGCCTGTGCG ACGGCTGCGC GCGCTGCTGC CTGGAAAAGC TCGAGGACGA GGACTCCGGC AAGATCTATT TCACCCATGT GTCGTGCCGG CTGCTCGACG CCGGGCTGTG CGGCTGCAAG GATTATGCGA ACCGCTCCGA CCAGGTGCCG GACTGCGTGC GGCTCGACCC GGCCAATGTC CGCACCCTGA ACTGGCTGCC GCCGAGCTGC GCCTACAAGC TGGTGGCCGA AGGCCGCGAT CTGTATTGGT GGCACCCGCT GATTTCCGGC GATCCCAACA CCGTGCATGA GGCGGGCGTC TCGGTGCGCG GCCGGGTGCA GGGCACCGAA CTCGACGTCA ACGACGAGCA CCTCGAACAG CACATCGTGC AGTGGCCGGG GCTGCTGCCG AAGCGTGCCC GGCTGAAGAA GCGGCCGGCG TAG
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Protein sequence | MTAPAKKPSA QEGLFWKTKT LEQMSGPEWE SLCDGCARCC LEKLEDEDSG KIYFTHVSCR LLDAGLCGCK DYANRSDQVP DCVRLDPANV RTLNWLPPSC AYKLVAEGRD LYWWHPLISG DPNTVHEAGV SVRGRVQGTE LDVNDEHLEQ HIVQWPGLLP KRARLKKRPA
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