Gene RPC_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1790 
Symbol 
ID3972055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1944189 
End bp1944701 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID637924903 
Producthypothetical protein 
Protein accessionYP_531668 
Protein GI90423298 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0377386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CCGCCAAAAA GCCCTCCGCG CAGGAGGGAT TGTTCTGGAA AACCAAGACA 
TTGGAACAGA TGTCGGGGCC CGAATGGGAG AGCCTGTGCG ACGGCTGCGC GCGCTGCTGC
CTGGAAAAGC TCGAGGACGA GGACTCCGGC AAGATCTATT TCACCCATGT GTCGTGCCGG
CTGCTCGACG CCGGGCTGTG CGGCTGCAAG GATTATGCGA ACCGCTCCGA CCAGGTGCCG
GACTGCGTGC GGCTCGACCC GGCCAATGTC CGCACCCTGA ACTGGCTGCC GCCGAGCTGC
GCCTACAAGC TGGTGGCCGA AGGCCGCGAT CTGTATTGGT GGCACCCGCT GATTTCCGGC
GATCCCAACA CCGTGCATGA GGCGGGCGTC TCGGTGCGCG GCCGGGTGCA GGGCACCGAA
CTCGACGTCA ACGACGAGCA CCTCGAACAG CACATCGTGC AGTGGCCGGG GCTGCTGCCG
AAGCGTGCCC GGCTGAAGAA GCGGCCGGCG TAG
 
Protein sequence
MTAPAKKPSA QEGLFWKTKT LEQMSGPEWE SLCDGCARCC LEKLEDEDSG KIYFTHVSCR 
LLDAGLCGCK DYANRSDQVP DCVRLDPANV RTLNWLPPSC AYKLVAEGRD LYWWHPLISG
DPNTVHEAGV SVRGRVQGTE LDVNDEHLEQ HIVQWPGLLP KRARLKKRPA