| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1741 |
|---|
| Symbol | |
|---|
| ID | 3972453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1893496 |
|---|
| End bp | 1894140 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637924854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531619 |
|---|
| Protein GI | 90423249 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0488886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGG ACACCGACCG ACTGATCGCA ACGCTCGCCG CCGACAACGG CTATCCGGCC
CGCCCGCCCG GGCCAACCCT GGCGATCGCC GTGCCGGTGG CATGGGCGGC GTCGCTGGCG
CTGTTGCTGG CGACGCTCGG CCTGCGCCCG GACTTCATGC AGGCGTTGCG CAATCCCTTA
TTCGATTTGA AGTTCGTGGT GACGCTGGCG TTGGCGCTCG TGGCGTTGGC GCTCGCGCTG
CAGGTGTCGC GGCCGCAACA ATTGCCGCGG CGCTGGTTCG GGCTGTTGCT GGTTCCGGTG
GCGCTGCTGG CGCTCGGCAT CGCCGGCGAG GCGCTGGCGC CGCCCCCCAC GCCGGCGCTG
CTGCGGCTGA TGGGCCACAA CGCGCTGTTG TGCATGGCGT CGATCCCGGC GTTGTCGCTG
CCGCTATTGG CCGCGGCGCT AATCGGGCTG CGTCAGGGCG CGCCGGCGCG TCCGGCGTTG
GCCGGCGCGA TCGCGGGGCT GTTGTCGTCG GGGCTGGCGG CGGCGCTCTA CGCCGCGCAT
TGCATCGACG ACTCGCCCTT GTTCGTGGCG ACCTGGTACA CTTTGGCGGT GGCGCTGGTG
ACGTTGCTCG GCGCCGCGAT CGGCGCGCGC GTGTTGCGTT ACTGA
|
|---|
| Protein sequence | MTMDTDRLIA TLAADNGYPA RPPGPTLAIA VPVAWAASLA LLLATLGLRP DFMQALRNPL
FDLKFVVTLA LALVALALAL QVSRPQQLPR RWFGLLLVPV ALLALGIAGE ALAPPPTPAL
LRLMGHNALL CMASIPALSL PLLAAALIGL RQGAPARPAL AGAIAGLLSS GLAAALYAAH
CIDDSPLFVA TWYTLAVALV TLLGAAIGAR VLRY
|
|---|
| |