Gene RPC_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1722 
Symbol 
ID3972375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1869423 
End bp1869968 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID637924835 
Producthypothetical protein 
Protein accessionYP_531600 
Protein GI90423230 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0258189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTT CCAAGATGGT GAGGTCTTCG TCAACGCAAC CGCGGTTAGG AGAATGCCAT 
GATGAGAATC GCACTGGGAC AGCAGCCCTC ATATTTTGCC TGTCCTCTGC GGCTATCGCT
GCCGACGCCA CCAAGCTCTA CCTTCCCGGC GATATCACCC TCGCTCAGGC CGAAAAGGTG
ATCGCGGTCG CCAAGGCGGC GGCCGTGAAG CAGGGCACGC TCATGAACAT CGCCGTGGTT
GACGCCGGCG GCAATCTGAA GGCTTTCGCG CGCATGGACG GCGCGTTTCT CGGCAGCATC
GACGTCTCCA TCAAGAAGGC CAAGACGGCG CGGATGTTCA ACATGTCGTC GAAGGAATTC
GGCGACCTGG CGCAGCCGGG CGAGCCGCTT TACGGCATCG AGGTCACCAA TGGCGGCCTG
GCGGTGTTCG GTGGCGGCCA ACTGATCCGC GATAAATCCG GCACCATCAT CGACGCGATC
GGCGTCAGCG GCAGTTCGGT CGAAGACGAC ATGGCCACCG CCGAAGCCGG CGCCAACGGG
CTTTGA
 
Protein sequence
MRPSKMVRSS STQPRLGECH DENRTGTAAL IFCLSSAAIA ADATKLYLPG DITLAQAEKV 
IAVAKAAAVK QGTLMNIAVV DAGGNLKAFA RMDGAFLGSI DVSIKKAKTA RMFNMSSKEF
GDLAQPGEPL YGIEVTNGGL AVFGGGQLIR DKSGTIIDAI GVSGSSVEDD MATAEAGANG
L