Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1722 |
Symbol | |
ID | 3972375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1869423 |
End bp | 1869968 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637924835 |
Product | hypothetical protein |
Protein accession | YP_531600 |
Protein GI | 90423230 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0258189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCTT CCAAGATGGT GAGGTCTTCG TCAACGCAAC CGCGGTTAGG AGAATGCCAT GATGAGAATC GCACTGGGAC AGCAGCCCTC ATATTTTGCC TGTCCTCTGC GGCTATCGCT GCCGACGCCA CCAAGCTCTA CCTTCCCGGC GATATCACCC TCGCTCAGGC CGAAAAGGTG ATCGCGGTCG CCAAGGCGGC GGCCGTGAAG CAGGGCACGC TCATGAACAT CGCCGTGGTT GACGCCGGCG GCAATCTGAA GGCTTTCGCG CGCATGGACG GCGCGTTTCT CGGCAGCATC GACGTCTCCA TCAAGAAGGC CAAGACGGCG CGGATGTTCA ACATGTCGTC GAAGGAATTC GGCGACCTGG CGCAGCCGGG CGAGCCGCTT TACGGCATCG AGGTCACCAA TGGCGGCCTG GCGGTGTTCG GTGGCGGCCA ACTGATCCGC GATAAATCCG GCACCATCAT CGACGCGATC GGCGTCAGCG GCAGTTCGGT CGAAGACGAC ATGGCCACCG CCGAAGCCGG CGCCAACGGG CTTTGA
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Protein sequence | MRPSKMVRSS STQPRLGECH DENRTGTAAL IFCLSSAAIA ADATKLYLPG DITLAQAEKV IAVAKAAAVK QGTLMNIAVV DAGGNLKAFA RMDGAFLGSI DVSIKKAKTA RMFNMSSKEF GDLAQPGEPL YGIEVTNGGL AVFGGGQLIR DKSGTIIDAI GVSGSSVEDD MATAEAGANG L
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