| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1665 |
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| Symbol | |
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| ID | 3972588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1797464 |
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| End bp | 1798708 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924780 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_531545 |
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| Protein GI | 90423175 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.910877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATCG ATCGCCGTAA CGTATTGCTC GGAGGCGCCG CCTCGCTCGC TCTGCTGCCG
CTGGCCGCAC GTGCACAGAC CTCGGAAGTG GTGATCGGCG TGATCTATCC GCTGTCCGGC
GCCTCGGCGC AGATCGGCGT CGACGCGCAG AAGGCGTTCG AGACCGCCGC CGACCTGATC
AACAAGAACT ACGATTTCGA TCTGCCGCTG GCCAAGGGCG AAGGCCTCTC CGGGCTCGGC
GGCGCCAAGG TGCGGCTGGT GTTCGCCGAC CATCAGGCCG ATCCGCAGAA GGGCCGCGCC
GAAGCCGAGC GCCTGATCAC CCAGGACAAG GTCTGCGCCA TCGTCGGCAC CTATCAGAGT
TCGGTCGCGG TCACCGTCAG CCAGATCTGC GAGCGCTATC AGATCCCGTT CATTTCCGCC
GACAACTCCT CGCCGAGCCT GCATCGCCGC GGTCTCAAAT TCTATTTCCG CCCGGCGCCG
CACGACGAGA TGTTCTCCAC TGCGATGTTC GATTTCTTCG ACGCGCAGAA GAAGAAGGGT
CACAAGATCG AGACCCTGGC GCTGTTCCAC GAGGACACCA TCTTCGGCAC CGACTCTTCG
AACGCGCAGC TCAAGCTCGC CGCCGAGCGC GGCTACAAGG TGGTGGTCGA CATCAAGTAC
CGCGCCAATT CGCCATCGCT GACCGCCGAA GTGCAGCAGC TCAAGGCGGC CGACGCCGAC
GTGCTGATGC CGTCGAGCTA CACCACCGAC GGCATTCTTC TGATCAAGAC CATGGGCGAA
CTCGGCTACA AGGCCAAGAA CATCGTGGCG CAGGACGCCG GCTTCTCCGA AAAGGCGTTG
TACGACGCGG TCGGCGACAA GATCCCGGGC GTGATCTCGC GCGGCTCGTT CTCGCTCGAT
CTGGCGGCCA AGCGGCCGAT GGTCGGCAAG ATCAACGACC TGTACAAGGA ACGCTCCGGC
AAGGACTTCA ACGACTATTC GTCGCGGCAG TTCATGGGGC TGATCGTGAT GGCGGACGCC
ATCAACCGCG CCAAGTCGAC CGACGGCGAG AAGATCCGCG ACGCGCTGGT CGCCACCGAC
CTGCCGGGCG AGCAGACCAT CATGCCGTGG AGCCGGGTCA AGTTCGACGA CATGGGACAG
AACAACTTCG CCGATCCGGT GCTGCTGCAG TATAACGGCG GCAAGTTCGT CACCGTGGCG
CCGCCGCAGG CCGCGGTGGC GGAAGCCATC TGGCCGATGA AGTAA
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| Protein sequence | MIIDRRNVLL GGAASLALLP LAARAQTSEV VIGVIYPLSG ASAQIGVDAQ KAFETAADLI
NKNYDFDLPL AKGEGLSGLG GAKVRLVFAD HQADPQKGRA EAERLITQDK VCAIVGTYQS
SVAVTVSQIC ERYQIPFISA DNSSPSLHRR GLKFYFRPAP HDEMFSTAMF DFFDAQKKKG
HKIETLALFH EDTIFGTDSS NAQLKLAAER GYKVVVDIKY RANSPSLTAE VQQLKAADAD
VLMPSSYTTD GILLIKTMGE LGYKAKNIVA QDAGFSEKAL YDAVGDKIPG VISRGSFSLD
LAAKRPMVGK INDLYKERSG KDFNDYSSRQ FMGLIVMADA INRAKSTDGE KIRDALVATD
LPGEQTIMPW SRVKFDDMGQ NNFADPVLLQ YNGGKFVTVA PPQAAVAEAI WPMK
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