Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1661 |
Symbol | |
ID | 3972584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1793995 |
End bp | 1794699 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924776 |
Product | ABC transporter related |
Protein accession | YP_531541 |
Protein GI | 90423171 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTCGG TGCATGAGGT CACCACCTCG TATCAGGGGC TGGTCGCGAT TTCCGAAGTC AGCATCGAGA TCGCCAAGGG CGAGGTCGTG CTGGTGGCGG GCGCCAACGG CGCCGGCAAA TCGACGCTGG TGAAATCGAT CGCCGGCGCC GAACGGCCGC GCACCGGCAT GGTGACGTTC GACGGCCAGC GCATCGACGG GCTGCAGCAG CACGTCATCA CCGCGCGCGG CATCGCCTAT GTGCCGGAGA ACCGCCGGCT GTTTCCGCGG CTGTCGGTGG CCGACAATCT GCGGCTCGGC AGCTACATGT TCCGCCACGA GGCGGACCGC GACGGCCCGC TCGATCTGGT GTTCGAATTG TTTCCCCGGC TGCAGGAGCG GCTCGAGCAG CGCGCCGAAA CGTTGTCCGG CGGCGAACAA CAGATGCTGG CGATCGGCCG CGCGCTGATG ACCCGGCCGC GGCTGTTGAT GCTCGACGAG CCGTCGCAGG GCATCATGCC GAAACTGGTC AGCGAAATCT TCCAGGCGGT GAAGAAGATC CGCGACGCCG GCATGACGGT GTTGATCGTC GAGCAGCGCA TGGCGGAATG TCTGGAGATC GCCGACCGCG CCTACATCCT GCGCACCGGC AAGGTCTTGA TGCAGGGCAC CGCCGCCGAA ATCGGCGACA ACCCCGACGT CCGCAAGGCG TATCTCGGGC TGTAG
|
Protein sequence | MLSVHEVTTS YQGLVAISEV SIEIAKGEVV LVAGANGAGK STLVKSIAGA ERPRTGMVTF DGQRIDGLQQ HVITARGIAY VPENRRLFPR LSVADNLRLG SYMFRHEADR DGPLDLVFEL FPRLQERLEQ RAETLSGGEQ QMLAIGRALM TRPRLLMLDE PSQGIMPKLV SEIFQAVKKI RDAGMTVLIV EQRMAECLEI ADRAYILRTG KVLMQGTAAE IGDNPDVRKA YLGL
|
| |