Gene RPC_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1661 
Symbol 
ID3972584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1793995 
End bp1794699 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637924776 
ProductABC transporter related 
Protein accessionYP_531541 
Protein GI90423171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGG TGCATGAGGT CACCACCTCG TATCAGGGGC TGGTCGCGAT TTCCGAAGTC 
AGCATCGAGA TCGCCAAGGG CGAGGTCGTG CTGGTGGCGG GCGCCAACGG CGCCGGCAAA
TCGACGCTGG TGAAATCGAT CGCCGGCGCC GAACGGCCGC GCACCGGCAT GGTGACGTTC
GACGGCCAGC GCATCGACGG GCTGCAGCAG CACGTCATCA CCGCGCGCGG CATCGCCTAT
GTGCCGGAGA ACCGCCGGCT GTTTCCGCGG CTGTCGGTGG CCGACAATCT GCGGCTCGGC
AGCTACATGT TCCGCCACGA GGCGGACCGC GACGGCCCGC TCGATCTGGT GTTCGAATTG
TTTCCCCGGC TGCAGGAGCG GCTCGAGCAG CGCGCCGAAA CGTTGTCCGG CGGCGAACAA
CAGATGCTGG CGATCGGCCG CGCGCTGATG ACCCGGCCGC GGCTGTTGAT GCTCGACGAG
CCGTCGCAGG GCATCATGCC GAAACTGGTC AGCGAAATCT TCCAGGCGGT GAAGAAGATC
CGCGACGCCG GCATGACGGT GTTGATCGTC GAGCAGCGCA TGGCGGAATG TCTGGAGATC
GCCGACCGCG CCTACATCCT GCGCACCGGC AAGGTCTTGA TGCAGGGCAC CGCCGCCGAA
ATCGGCGACA ACCCCGACGT CCGCAAGGCG TATCTCGGGC TGTAG
 
Protein sequence
MLSVHEVTTS YQGLVAISEV SIEIAKGEVV LVAGANGAGK STLVKSIAGA ERPRTGMVTF 
DGQRIDGLQQ HVITARGIAY VPENRRLFPR LSVADNLRLG SYMFRHEADR DGPLDLVFEL
FPRLQERLEQ RAETLSGGEQ QMLAIGRALM TRPRLLMLDE PSQGIMPKLV SEIFQAVKKI
RDAGMTVLIV EQRMAECLEI ADRAYILRTG KVLMQGTAAE IGDNPDVRKA YLGL