| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1637 |
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| Symbol | |
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| ID | 3972871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1770138 |
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| End bp | 1771742 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924753 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_531518 |
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| Protein GI | 90423148 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2068] Uncharacterized MobA-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.545096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCG GCCCCGTCGC ACCCGTTGAC GCGATCGGCG GCGTCACCGT GCACACGCTG
CGCCAAGGCA CGCTGGTGTT GAAGAAAGGC ACGCTGATCG GCGATGCCGA AGTGGCTGCG
CTCACGGCGG CCGGCGTCAA AGACATCGTC GTGGTGCAAT TGGAGCAAGG CGACGTCTCC
GAGGACGTCG CCGCGGCCAG CGTCGCGCAG GCGGTGGCGG GCGCAGGCGT CCATGTCGAG
CGTGCCGTCA CCGGCCGCGC CAATCTGTTC GCGGGGCAGG CCGGCGTGCT GGTGGTCGAT
CGCGATTGTG TCGATCGCAT CAACCGGGTC GACGAGGCGA TCACTTTCGC CACCTTGCCG
GCGTTCAAGC CGGTGGTCGA GGGCGAGATG ATCGCCACCG TGAAGATCAT TCCGTTTGGC
GTCGCCGGCA GCCTGCGCGA TGCCGCGGTG ACGGCGGCCG GCGGTGGCGC GCTGAAGATC
GCGTCGTATC GCATCAAGCG GGTCGGCGTG GTGGCGACGC AGCTGCCTGG ATTGGCGTCG
AAAGTGATCG ACAAGACGCT GCGGGTCACC GCCGAGCGCT TGGCGCCGGC GGGTGCGACC
ATCATCGCCG AGCGCCGCGT GCCGCACGAT CAGGCCGCGC TGGCGGCGGC GATCCGCGAA
ATGCTCACGC TCAAAGCCGA GCTGGTGATC GTGTTCGGCG CCTCGGCGAT CGCCGACCGC
CGCGACGTCA TCCCGGCGGC GATCGACCGT ATCGGCGGGA GCATCGCGCA TTTCGGCATG
CCGGTCGATC CCGGCAATCT GTTGCTGATC GGACAAGCGC AAGGCGTGCC GGTGCTGGGT
GCGCCGGGCT GCGCGCGCTC GCCGGTGGAG AATGGTTTCG ACTGGGTGCT GATGCGGCTG
TTGGCCGGTC TTGCTGTGAC GCGCGACGAC ATCACCGGGC TCGGCGTCGG GGGATTGCTG
ATGGAGATCG TGACGCGGCC GCAGCCGCGG GTGCCGCTCG ACGCCGACGG CAGCCATCAG
GTCGCGGCGA TCGTGCTGGC CGCTGGCCGC TCGACAAGGA TGGGCGGGCC GAACAAATTA
TTGGCCGAAC TCAACGGCAC GCCGCTGGTG CGGATCGTGG TGGACCAGGC GTTGGCCTCC
AAAGCCGGCG AGGTGATCGT GGTCACCGGC CATCAGGCCG ACAAGGTCGA AGCCGCGCTT
CGCGGGCTCA AGGTGCGTCT GGTGCACAAT GCGGATTTCG CGCAAGGTCT TGCCTCCTCG
GTGAAGGCCG GCATCGCCGC CGTGCCGACC GCGGCCGACG GCGCGGTGAT TTGCCTCGGC
GATATGCCGC TGGTCGATTC CCGGCTGCTG GATCGGCTGA TCGACGCCTT CGCGCCGGAT
CGCGGCGCGC TGATCGCGGT GCCGGTCAGC GACGGCCGCC GCGGCAATCC GGTGCTGTGG
TCGCGGCGGT TCTTCGCCGA ACTGATGACG CTGGACGGCG ACATCGGCGC CCGTCACCTG
ATCGCCAAGC ACAGCGAAGC CGTGGCCGAA GTGACAGTCG ACGGCGCCGG CGCGTTCCTC
GACATCGACA CGCCGCAGGC CTTGGAAGAC GCCAGGCGGC AGTGA
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| Protein sequence | MKFGPVAPVD AIGGVTVHTL RQGTLVLKKG TLIGDAEVAA LTAAGVKDIV VVQLEQGDVS
EDVAAASVAQ AVAGAGVHVE RAVTGRANLF AGQAGVLVVD RDCVDRINRV DEAITFATLP
AFKPVVEGEM IATVKIIPFG VAGSLRDAAV TAAGGGALKI ASYRIKRVGV VATQLPGLAS
KVIDKTLRVT AERLAPAGAT IIAERRVPHD QAALAAAIRE MLTLKAELVI VFGASAIADR
RDVIPAAIDR IGGSIAHFGM PVDPGNLLLI GQAQGVPVLG APGCARSPVE NGFDWVLMRL
LAGLAVTRDD ITGLGVGGLL MEIVTRPQPR VPLDADGSHQ VAAIVLAAGR STRMGGPNKL
LAELNGTPLV RIVVDQALAS KAGEVIVVTG HQADKVEAAL RGLKVRLVHN ADFAQGLASS
VKAGIAAVPT AADGAVICLG DMPLVDSRLL DRLIDAFAPD RGALIAVPVS DGRRGNPVLW
SRRFFAELMT LDGDIGARHL IAKHSEAVAE VTVDGAGAFL DIDTPQALED ARRQ
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