Gene RPC_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1632 
Symbol 
ID3972866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1765995 
End bp1766846 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID637924748 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_531513 
Protein GI90423143 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.43888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAT TCAAATATCA TCGCCCGGCG ACCGTGCGGC AGGCGGCAAA TATCCTGCTC 
AAGAACGAGG ACGCCAAGCT GATCGCCGGC GGCCACACGT TGTTGCCGGT GATGAAGCAG
CGGCTCGCCG CCCCGCCGCA TCTTGTCGAC CTGTCGCATG TCGAGGGCCT GGACGGCATC
GAGATCAAGG GCCGCTCTTT GGTGATCGGC GCCACCGCCA AGCACGCCGA TGTCGCCAGT
TCGGCGATCG TCGGCGAAGC GATCCCCGCG CTCGCCGAAC TCGCCTCGCT GATCGGCGAT
CCGGCGGTGC GCCACAAGGG CACGCTCGGC GGCTCGCTCG CCAACAACGA TCCGACCGCG
GACTATCCGG CGGCGGTGCT GGCGCTCGGC GCTACCATCG TCACCAACAA GCGCCGGCTG
AAGCCGGAAG AGTTCTTCCA GGGCCTGTTC TCGACCGCAC TGGAGCCCGA CGAGATCATC
ACCAAGGTGC AGTTCCCGAT CCCGAAGAAG GCCGCCTACA TCAAATTCCG CAACCAGGCC
TCGCGCTACG CGCTGGTCGG CGTGTTCGTC GCCAAGCGGC CGTCCGACGT TCGCGTCACC
GTGACCGGCG CCGGCTCCGA GGGCGTGTTC CGCGTCGCCA GTTTCGAGGA GGCCTTGAAG
AAGCGGTTTT CGCCGAAGGC GTTGGAGGGG CTTCACGTCG ACGCCGACGG CCTCAACAGC
GATCTGCACG GCAGCGCGGA ATATCGCGCG CATCTGATTG GCGTGCTGGC CAAGCGCGCG
GTCGAAGCCG CCAACGCCAA GCCGGAGAAG GAACTGCCGG AGCCCGACCC GACCCAGCCG
TCGGCGGGGT AG
 
Protein sequence
MYEFKYHRPA TVRQAANILL KNEDAKLIAG GHTLLPVMKQ RLAAPPHLVD LSHVEGLDGI 
EIKGRSLVIG ATAKHADVAS SAIVGEAIPA LAELASLIGD PAVRHKGTLG GSLANNDPTA
DYPAAVLALG ATIVTNKRRL KPEEFFQGLF STALEPDEII TKVQFPIPKK AAYIKFRNQA
SRYALVGVFV AKRPSDVRVT VTGAGSEGVF RVASFEEALK KRFSPKALEG LHVDADGLNS
DLHGSAEYRA HLIGVLAKRA VEAANAKPEK ELPEPDPTQP SAG