Gene RPC_1615 details

Gene Information

• Locus tag: RPC_1615
• ID: 3972830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 1749687
• End bp: 1750475
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637924731
• Product: calcium-binding EF-hand
• Protein accession: YP_531496
• Protein GI: 90423126

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.959507
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGTCAG CGCTCACTGC CGCGTCGTCC GCGCTCGATC TCTTGAAATC GCTGAGCTCG 
TCGAAAACCT CGTCGAGTTC ATCGACCTCG TCGAGCAAGA GCGCGGCGAC CAGCCTGTTC 
GAGGTCGACA GCGACTCCAA GAAGGACAAA AACTCCAGCG CGACGTCGAG CTCCAGCGCC 
TCGTCGCAAA GCGGCGCGTT GTCGTCGAGC CTGCTCAGCG CGCTGCTCGC CGCGCAGAGC 
CAGAGCACGG CCAGCTCGAC TTCGACCAGT TCGACGGATG CGACCGCGTC GGACCCGCGC 
GACGCCGTGC TGAAGGATCT GTTCGCCAAG CTCGACAGCG ACGGCGACGG CAGCGTCACC 
AAGGCGGAAT TCGAGGACAA GCTCGGCGCC GGCGGCACCA ACACCGCCAA CGCGGATTCG 
GTGTTCGCCA AGCTCGACAA GGACAGCGAC GGCGCGGTCG GCATCGACGA ATTGGGATCG 
GCGCTGAAGG GCTCCGGCAA GAGTCATCAC GCCGCGGGCG GCGCGGGCGA TGCCGGCGGT 
GCGGGCGGCG GCGGCGGATC CGGCGAGGAC TCCTCCGGCA CCAAGACCAC CACCACGGCC 
AACGCCGACG GCTCGATCAC CACCTCTTTG ACTTACGCCG ACGGCTCCAA AGTGACGATG 
ACCTCGGCGG CAAGCTCCAC CTCGTCGGCC AGCGCCACCT CGTCGTATAA TTTCATCGAG 
CAGATGATCC AGCGCCAGGC CAAGGCGGCC TCGGCCTCCA CCGCCTCCGC GGTGTCGGTC 
AGCGCCTGA 

 

Protein sequence

MLSALTAASS ALDLLKSLSS SKTSSSSSTS SSKSAATSLF EVDSDSKKDK NSSATSSSSA 
SSQSGALSSS LLSALLAAQS QSTASSTSTS STDATASDPR DAVLKDLFAK LDSDGDGSVT 
KAEFEDKLGA GGTNTANADS VFAKLDKDSD GAVGIDELGS ALKGSGKSHH AAGGAGDAGG 
AGGGGGSGED SSGTKTTTTA NADGSITTSL TYADGSKVTM TSAASSTSSA SATSSYNFIE 
QMIQRQAKAA SASTASAVSV SA