| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1597 |
|---|
| Symbol | |
|---|
| ID | 3973136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1731893 |
|---|
| End bp | 1732864 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637924713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531478 |
|---|
| Protein GI | 90423108 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4301] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03438] probable methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.534305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAC ATGCCGCCGC GCTGAATCCA GCGCAACGGT TCGACGAGCC GGCCTCGGCC
TTCGCGCAGG ATGCGATCGA GGGGCTGTCG AGCCATCCGA AACGGCTGTC GCCGAAATAT
TTCTACGACG CCGAAGGCTC GGCGCTGTTC GAACAGATCA CCGGCCTGCC GGAGTATTAC
CCGACCCGCA CCGAACTCGG CATTCTGCGG GATCGCGCGA CCGAGATCGG CGCGATGATT
CCGCAAGGGG CCGCGCTGGT CGAATTCGGC GCCGGCTCGA CCGCCAAGGT GCGCACGCTG
CTGCCCGACT GTGCGCTCGG CGCCTATGTG CCGGTGGATA TTTCCGGCGA CTTCCTCAAC
GCGCAGGCCG CCGCGCTACG GCAGGATTTT CCCGAACTCG CGGTCTATCC GGTGACCGCG
GATTTCACCG CGCCGTTCGC GCTGCCGCAT ACGGTGCGCG AATTGCCCAA GGTCGGGTTC
TTCCCCGGCT CGACGATCGG CAATTTCGAG CCGTTTGAGG CCTGCGGGTT CCTGCGCAGC
GCCCGCGCCA TCCTCGGCGC CGAGGCAACG CTGCTGATCG GCGTCGACCT GGAGAAGGAC
GACCGGGTGC TGAGCGCGGC CTATAACGAC GCCGCCGGCG TCACCGCCAA GTTCAATCTC
AACGTGCTGG CGCGGATCAA CCGCGAACTC GACGGCGACT TCGAGCTGTC GGCGTTCGTG
CACCGCGCGA TCTACAACCG CGAGCGCCAC CGCATCGAGA TGCATCTGAT CAGCCGCACG
GCGCAGACCG CGCATCTGCT CGGCCACAGC ATCACGTTCC GCGCCGGCGA AACCATCCAC
ACCGAGAGCA GCTACAAATA CAGCGTCGAG CGCTTCAACG CGCTGGCGCG CGGCGCGGGC
TGGACGCCGC GGGCGTTGTG GACCGACGCC GACGGCATGT TCTCGGTGCA TGCGCTGGCG
GCGGCGGAGT AG
|
|---|
| Protein sequence | MNVHAAALNP AQRFDEPASA FAQDAIEGLS SHPKRLSPKY FYDAEGSALF EQITGLPEYY
PTRTELGILR DRATEIGAMI PQGAALVEFG AGSTAKVRTL LPDCALGAYV PVDISGDFLN
AQAAALRQDF PELAVYPVTA DFTAPFALPH TVRELPKVGF FPGSTIGNFE PFEACGFLRS
ARAILGAEAT LLIGVDLEKD DRVLSAAYND AAGVTAKFNL NVLARINREL DGDFELSAFV
HRAIYNRERH RIEMHLISRT AQTAHLLGHS ITFRAGETIH TESSYKYSVE RFNALARGAG
WTPRALWTDA DGMFSVHALA AAE
|
|---|
| |