Gene RPC_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1581 
Symbol 
ID3972929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1719840 
End bp1720124 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content62% 
IMG OID637924697 
Producthypothetical protein 
Protein accessionYP_531462 
Protein GI90423092 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.89904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.044481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC AAATTTTCGA CAGCGTCTGG GATGCCCTGG AGAATTCGCC GGCCGAGGCC 
GCCAATATGA AAGCCCGGTC CGGGCTGTTG ATCGCTATTC GCGACGTTGT CGACAGCTGG
CAACTGACCC AGGCCGAAGC GGCCAAGCGC CTCGGCGTCA CCCAGCCGCG GATGAACGAC
TTGCTACGCG GTCGTATCGA CAAGTTCAGC TTGGACGCGT TGATGATGCT TGCGACGGGC
GCCGGCCTCA CCGTGGAATG GCGCGTGGTC AAACCGGCGG CGTGA
 
Protein sequence
MTEQIFDSVW DALENSPAEA ANMKARSGLL IAIRDVVDSW QLTQAEAAKR LGVTQPRMND 
LLRGRIDKFS LDALMMLATG AGLTVEWRVV KPAA