| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1569 |
|---|
| Symbol | |
|---|
| ID | 3973125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1702297 |
|---|
| End bp | 1702662 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924685 |
|---|
| Product | glycine cleavage system protein H |
|---|
| Protein accession | YP_531450 |
|---|
| Protein GI | 90423080 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00108538 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TGTTTACCCC CGATCACGAA TGGCTGCGCA TCGAGGGCGA CGTCGCCACC
ATCGGCGTCA CCGATTATGC GCAGTCCCAG CTCGGCGACG TGGTGTTCGT CGAACTGCCG
AAGATCGGCC GGCAATTGAA GAAGGCCGAA GCCGCCGCGG TGGTGGAATC GGTCAAGGCC
GCTTCCGACG TCTACGCGCC GATCAGCGGC GAAGTGCTCG AAATCAACGA CACGCTGCAG
ACCGACCCGG CACTGGTCAA TTCCGACGCC GGCGGCGCCG CCTGGTTTTT CAAGCTGAAG
ATCGCCGACA AAACCGAACT CGACGGATTG CTGGACGAAG CCGCCTACTC CGCCCACACC
GCTTGA
|
|---|
| Protein sequence | MTTLFTPDHE WLRIEGDVAT IGVTDYAQSQ LGDVVFVELP KIGRQLKKAE AAAVVESVKA
ASDVYAPISG EVLEINDTLQ TDPALVNSDA GGAAWFFKLK IADKTELDGL LDEAAYSAHT
A
|
|---|
| |