Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1500 |
Symbol | |
ID | 3972148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1637509 |
End bp | 1638108 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637924615 |
Product | hypothetical protein |
Protein accession | YP_531381 |
Protein GI | 90423011 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.832478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0836613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCG TTGTTCCGGA TGTCAACGTT CTGGTCTCGC GGGCCAATGC TGATCGCGCC GGACGGTCAT CGACCATCAG TCAGAAGGTG GTTCAGCAAC TCGTCTCCGG CGTGCTCAAC GGCGAGCCGG TGCAGCTCGC AATGTCGTTC AAGATGCTCG ATACCTATCG CGACGTGTTG CTGCGGAAAG GATATGACCG CGAAGCCGTC GAGCAATCCG CCGACGGACT GATCGCGCTG ATGCGCTACG GCCCGATCGG ATTCGATCCC TATCTGGTAC TCGGCGGCAC GCCCGAGCTG TCGGTGATGG ATGTCGAAGA CGGCGGGGTG CTGGCGACCG CCTATGCCGC GCACGCCAAC CTCCTGGTCA CCGACAATTT GAAGGATTTC GCCGGTCACG ATGCCGAGGC CTACGTCACG TCGGTCGCGC GGTCGGCAGA CGGAACGCGT CGCGATCTGT ATTGCGTGAT CCGAAAGCGA CCTGACGGCC ATTCGCTGAT CGTGGTCCAT CCTGCGGACT TCGTGCGTTG GATGGAAAGC GGATTCAAGA TGTCCGCCGA CGCCATCAAG GCGAGTTGCG GCGCCAAGCC GCAAGCCTGA
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Protein sequence | MLIVVPDVNV LVSRANADRA GRSSTISQKV VQQLVSGVLN GEPVQLAMSF KMLDTYRDVL LRKGYDREAV EQSADGLIAL MRYGPIGFDP YLVLGGTPEL SVMDVEDGGV LATAYAAHAN LLVTDNLKDF AGHDAEAYVT SVARSADGTR RDLYCVIRKR PDGHSLIVVH PADFVRWMES GFKMSADAIK ASCGAKPQA
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