Gene RPC_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1500 
Symbol 
ID3972148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1637509 
End bp1638108 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID637924615 
Producthypothetical protein 
Protein accessionYP_531381 
Protein GI90423011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.832478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0836613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG TTGTTCCGGA TGTCAACGTT CTGGTCTCGC GGGCCAATGC TGATCGCGCC 
GGACGGTCAT CGACCATCAG TCAGAAGGTG GTTCAGCAAC TCGTCTCCGG CGTGCTCAAC
GGCGAGCCGG TGCAGCTCGC AATGTCGTTC AAGATGCTCG ATACCTATCG CGACGTGTTG
CTGCGGAAAG GATATGACCG CGAAGCCGTC GAGCAATCCG CCGACGGACT GATCGCGCTG
ATGCGCTACG GCCCGATCGG ATTCGATCCC TATCTGGTAC TCGGCGGCAC GCCCGAGCTG
TCGGTGATGG ATGTCGAAGA CGGCGGGGTG CTGGCGACCG CCTATGCCGC GCACGCCAAC
CTCCTGGTCA CCGACAATTT GAAGGATTTC GCCGGTCACG ATGCCGAGGC CTACGTCACG
TCGGTCGCGC GGTCGGCAGA CGGAACGCGT CGCGATCTGT ATTGCGTGAT CCGAAAGCGA
CCTGACGGCC ATTCGCTGAT CGTGGTCCAT CCTGCGGACT TCGTGCGTTG GATGGAAAGC
GGATTCAAGA TGTCCGCCGA CGCCATCAAG GCGAGTTGCG GCGCCAAGCC GCAAGCCTGA
 
Protein sequence
MLIVVPDVNV LVSRANADRA GRSSTISQKV VQQLVSGVLN GEPVQLAMSF KMLDTYRDVL 
LRKGYDREAV EQSADGLIAL MRYGPIGFDP YLVLGGTPEL SVMDVEDGGV LATAYAAHAN
LLVTDNLKDF AGHDAEAYVT SVARSADGTR RDLYCVIRKR PDGHSLIVVH PADFVRWMES
GFKMSADAIK ASCGAKPQA