| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1426 |
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| Symbol | |
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| ID | 3973694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1548753 |
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| End bp | 1550555 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924541 |
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| Product | ABC transporter related |
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| Protein accession | YP_531307 |
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| Protein GI | 90422937 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.484971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCCCACGCAA GATAACCGAC GATCCCTATG GCGCGATGAT TCTGGTCCGC
CGCCTGGTGA TGGAACAGGG CGCGGTGTAT TGGCGCCGCT ATCTGACGGC GTTCGCCATG
ATGGCGGTGG CGGCCGGCGC CACCGCGTTG TCGGCCTATC TGCTCGGCGA GGTCATCAAC
AAAGCCTATG TCGATCGGGA CGTGCGCGGC ATCGCCATCC TGTCGATCGT CACCATCGTG
ATCTTTTCGC TGAAGGGCGC TGCGACCTAC GGCCAGACCG TGATGCTGTC GCAGATCAGC
AACGCCATCC TCGCCAACAA TCAGCGCCGG CTGTTCGCCA AACTGATGAG CGAGAGCGTC
GGGTTCTTTT CCGACCGCCA CTCCTCCGAG TTCCTGGCGC GGCTGTCCGC CGGCGCCACC
TCGGTAACCC AGGTGCTCAG CCTGCTGATC AACGCGGTCG GCCGCGATCT GCTGTCGCTG
ATCGCGCTGG TCACCGTGAT GCTGATGCAG GACCCGTTCA TGGCGCTGTT CGGCTTCCTG
ATCGCGCCGC CGGCGCTACT GGTGATCCGC AAGCTGGTCC GCCGCATCAA GGGCCTCGCC
CACAACCAAT TCACCGGCAA TGCCGACATT CTGGAGACCA TGCAGGAGAG CCTGCAGGGC
ATCCGCACCG TCAAGGCGTT CACGCTCGAA CAGACCATGC GCGAGCGGAT CGACGCCAAC
ATCGCCGCGG TGCAGGCCAC CGCCGACAAG ATGGCCAAGG TCTCCAACCG CGCCAGCCCG
CTGATGGAGA CGCTGGGCGG CGTGGCGATC GCCGCCTCGC TGATGTATGG CGGCTACCGC
GTGGTGGCGA TGGGCGCCAC GCCCGGTCAG TTCTTCTCGT TCCTGACCGC GTTCCTGCTG
GCCTACGAGC CGGCGAAGCG GCTGGCGCGG CTCAACATCG AGCTCAATTC CAGCCTGGTC
GGCGCCAAGA TGCTCTTGGA GATCGTCGAC AGTCCGGCCT CGGAGCCCGA CGACAGCGAC
AAGCCGGCGC TGCGACTGAC CGAAGCGCGC GTCGAACTGC GCGACGTCAA CTTCGCCTAT
CGGCCGAACG AGCCGGTGCT GTCGCATATG AGCTTCGTCG CCGAACCCGG CAAGGTCACC
GCGCTGGTCG GCCCCTCCGG CGGCGGCAAG TCCACCGTGC TGTCGCTGCT GCTGCGGCTC
TATGAGTATC AGTCCGGCGA CATTCTGATC GACGGCCAAT TGGTGCAGTC GGTGTCGCGG
CGTTCGCTGC GGCAGCAGAC TGCCTATGTC GGCCAGGACG TCTATCTGTT CCGTGACACC
ATTCGCGGCA ACATCGCGTT CGGCAAGATC GGCGCCACCG ACGACGAGAT CGTCGCCGCC
GCGAAGGCCG CCAGCGCGCA TGATTTCATC ATGAGTTTTC CGCTCGGCTA CGACACCCCG
GTCGGCGAGC ACGGCACGCA ATTGTCCGGC GGCCAGCGCC AGCGCGTCGC GATCGCCCGC
GCGCTGGTGA AGAACGCCCC GATCATCCTG CTCGACGAGG CCACCGCGGC GCTGGATTCG
GAATCCGAAA AATTGGTGCA GGCGGCGATC GATCGGCTGT GCCAGAACCG CACCACCATC
GTGATCGCGC ATCGGCTGCA CACCATCATG AACGCCGACG CCATCCTGGT GGTCGAGGGC
GGCGAGATCG TCGAGCGCGG CCGCCACGAC GATCTGTTGC GCCGCGACGG CCGCTATGCC
TCGTTCTTCC GGCTGCAGCA TCGCGACGCC ACGCCTGTGT TACCGATCGC CGCCTCCGCG
TAA
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| Protein sequence | MTEPPRKITD DPYGAMILVR RLVMEQGAVY WRRYLTAFAM MAVAAGATAL SAYLLGEVIN
KAYVDRDVRG IAILSIVTIV IFSLKGAATY GQTVMLSQIS NAILANNQRR LFAKLMSESV
GFFSDRHSSE FLARLSAGAT SVTQVLSLLI NAVGRDLLSL IALVTVMLMQ DPFMALFGFL
IAPPALLVIR KLVRRIKGLA HNQFTGNADI LETMQESLQG IRTVKAFTLE QTMRERIDAN
IAAVQATADK MAKVSNRASP LMETLGGVAI AASLMYGGYR VVAMGATPGQ FFSFLTAFLL
AYEPAKRLAR LNIELNSSLV GAKMLLEIVD SPASEPDDSD KPALRLTEAR VELRDVNFAY
RPNEPVLSHM SFVAEPGKVT ALVGPSGGGK STVLSLLLRL YEYQSGDILI DGQLVQSVSR
RSLRQQTAYV GQDVYLFRDT IRGNIAFGKI GATDDEIVAA AKAASAHDFI MSFPLGYDTP
VGEHGTQLSG GQRQRVAIAR ALVKNAPIIL LDEATAALDS ESEKLVQAAI DRLCQNRTTI
VIAHRLHTIM NADAILVVEG GEIVERGRHD DLLRRDGRYA SFFRLQHRDA TPVLPIAASA
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