Gene RPC_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1414 
Symbol 
ID3973065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1541097 
End bp1541363 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content65% 
IMG OID637924529 
Producthypothetical protein 
Protein accessionYP_531295 
Protein GI90422925 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0680005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.577769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA CCAACAACCG GCTTTTCGAC GAGATCGGAC GCCTGATGAA CGACGCCGCC 
GGCGCCGCCC AGGGCGTCAA GCGCGAGGTC GATACCGTCG TGCGCACCCA GGCAGAGAAA
TTTTTGCGCG ACCTCGATCT GGTCAAGCGC GAGGAATTCG ACGTGGTGAA GGACATGGTG
CGGCTCGCCC GCGAGGAAAA CGAGGCGCTG AAGGTCCGCA TCGCGGCGCT GGAAGCCAAG
CTCGGCAGCG GCGCGCCGAC CGCCTGA
 
Protein sequence
MTQTNNRLFD EIGRLMNDAA GAAQGVKREV DTVVRTQAEK FLRDLDLVKR EEFDVVKDMV 
RLAREENEAL KVRIAALEAK LGSGAPTA