| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1388 |
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| Symbol | |
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| ID | 3973309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1512842 |
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| End bp | 1513954 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924503 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_531269 |
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| Protein GI | 90422899 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.632887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.497435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTTT CGTTCGACAA GGTCGACGGC TCGATCTGGC TGACATTCGA CATCCAGCCT
GCGGCACATC CCGTTGCGCC GAAGGATCGC GCGGCGAAAC TGGAGAACCC GGGCTTCGGC
CGGGTGTTCA CCGATCATAT GGCGCTGGTG CACTACGATC AGGCCAAGGG TTGGCACGGC
GCGCGCGTCG AGTCCCGCGC CAACTTCCCG CTCGATCCGG CGACCGCGGT GCTGCACTAC
GCGCAGGAGA TTTTCGAAGG GCTGAAGGCC TACAAGCGCG ACGACGGCGG CATCAACCTG
TTCCGCCCCG ACGCCAATGC GCGGCGCTTC AAGAATTCCG CCGACCGCAT GGCGATGGCG
CCGCTGCCGG AGGCGGTGTT CATCGAAGCG GTCGAGCAAC TGGTGCGGAT CGACCGCGAC
TGGATCCCCG GCGGCGAAGG CAGCCTTTAT TTGCGCCCCT TCATGATCGC CAGCGAGATC
TTCCTCGGCG TCAAGCCGTC GGCGGAATAC ATCTTCGCGG TGATCGCCTC GCCGGTCGGC
TCGTATTTCA AGCGCGGCCC GGCCCCGGTC TCGATCTGGG TGTCGGAAAA CTACACCCGC
GCCGCGGTCG GCGGCACCGG TGCGGTGAAA TGCGGCGGCA ACTACGCCGC CTCGTTGCGC
GCGCAGGCCG AGGCGATCGA TCACGGCTGC GACCAGGTGG TGTTCCTCGA CGCGTTGGAG
CGCCGCTACA TCGAAGAGCT TGGCGGCATG AACGTGTTCT TCGTGTTCGA CGATGGCTCG
CTGGCAACGC CGCCGCTCGG CACCATCTTG CCCGGCATCA CCCGCGATTC GATCATCGCA
CTCGCCAAGG AATCCGGCAC GACGGTGCGT GAGGAGCCCT ACACGCTGGC GCAGTGGCGT
GCCGATGCAG CCAGCGGCAA GCTGAAAGAA GCGTTCGCCT GCGGCACCGC GGCGGTGATC
TCGCCGATCG GCAAAGTGTG TTCGGCGAGC GGCGATTTCG TCATCAATGG CGGCGAAGCC
GGCAAAGTGG CGATGGGCTT GCGCAAGCAG CTGGTCGATA TCCAATACGG CCGCGCGCCG
GATACCCACG GCTGGGTCCG CAACGTCGGG TGA
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| Protein sequence | MGVSFDKVDG SIWLTFDIQP AAHPVAPKDR AAKLENPGFG RVFTDHMALV HYDQAKGWHG
ARVESRANFP LDPATAVLHY AQEIFEGLKA YKRDDGGINL FRPDANARRF KNSADRMAMA
PLPEAVFIEA VEQLVRIDRD WIPGGEGSLY LRPFMIASEI FLGVKPSAEY IFAVIASPVG
SYFKRGPAPV SIWVSENYTR AAVGGTGAVK CGGNYAASLR AQAEAIDHGC DQVVFLDALE
RRYIEELGGM NVFFVFDDGS LATPPLGTIL PGITRDSIIA LAKESGTTVR EEPYTLAQWR
ADAASGKLKE AFACGTAAVI SPIGKVCSAS GDFVINGGEA GKVAMGLRKQ LVDIQYGRAP
DTHGWVRNVG
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