Gene RPC_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1366 
Symbol 
ID3972462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1490985 
End bp1491314 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID637924481 
Producthypothetical protein 
Protein accessionYP_531247 
Protein GI90422877 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0994067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA TCGCATGGAT GGCCTGGACC GCGCCGACCG CGATTTTCTT CGTGCTGTTG 
GCCGGCACGC TCGCGGTGAT GACCTGGCTC GCGGTGGCCT ATCCGGAGGC CGAGCGCGTC
GGAATTTTAA GGATTCCCAC CACCCGCGGC GACCGGCTGT TTCTGTCGCT GATTTCCGCC
GCGGTGATCC ATCTGGCGTG GATCGGGTTC GTCGGCAGTG ATCCCTTGGC GACGCTGCCG
ATCGGCACCG ATGGAATTGA AATCTCGAGC CTGTGGCTCG CGACCGTCCT TTCGCTGCTC
TTTGCCGTTG CGATCTTTCG CAACGTCTGA
 
Protein sequence
MDNIAWMAWT APTAIFFVLL AGTLAVMTWL AVAYPEAERV GILRIPTTRG DRLFLSLISA 
AVIHLAWIGF VGSDPLATLP IGTDGIEISS LWLATVLSLL FAVAIFRNV