| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1313 |
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| Symbol | |
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| ID | 3972515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1427079 |
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| End bp | 1428365 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924423 |
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| Product | light-independent protochlorophyllide reductase subunit N |
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| Protein accession | YP_531194 |
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| Protein GI | 90422824 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01279] light-independent protochlorophyllide reductase, N subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.29904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTTC TCGCTCAGGG CTGCGATGTC GCCCCGCCGA ACAATCTGAC CAAGCCGGTG
CGCCACGAGA GTGGGCAGCG CGAGGTGTTC TGCGGGCTGA CCGGAATCGT GTGGCTGCAT
CGCAAGATCC AGGACGCGTT CTTCCTGGTG GTCGGCTCGC GGACCTGCGC GCATCTGATC
CAATCGGCGG CGGGGGTGAT GATCTTCGCC GAGCCGCGCT TCGCCACCGC GATCATGGAA
GAGAAGGACC TCGCCGGTCT CACCGACGCC AATACCGAAC TCGATCGCAT CGTCACGCAA
CTCTTGACGC GGCGTCCCGA TATCAAACTG CTGTTTCTGG TCGGCTCCTG TCCGTCGGAA
GTGATCAAGC TCGATCTGTC GCGCGCGGCA TTGCGGCTGT CGCAGACGTT CTCGCCGGGC
GTTCGCATCC TCAGCTATTC CGGCAGCGGC ATCGAGACCA CCTTCACCCA GGGCGAGGAC
GCCTGTCTCG CTTCATTGGT TCCGGAACTT CCAGCCGCAT CCGGCAAGGA CGCCTCGCTG
CTGGTGGTGG GGTCGATGGC CGATGTGGTC GAAGACCAGT TCGTCCGGAT GTTCGAGGCG
CTCGGCATCG GGCCGGTGCA GTTTCTTCCG CCGCGCAATT CCGCGACGCT TCCCAGCGTC
GGCCCTAACA CTAAGTTTTT GCTGGCGCAG CCGTTTCTGG CTGATACCGC GCGCGAGCTG
GAAAATCGCG GTGCGACGCG GCTGCGGGCC CCGTTCCCGC TCGGGGTCGA GGGGACCACC
GCCTGGTTGC GTGCCGCCGC CAATGCCTTC GCCATCGATC CGGCGCTGTT CGACAAGGTG
ACGCAGCCGG CGCGCGCCCG GGCCGAGCGC GCGCTCGACA ACTACCGCAA GGAATTGGCG
GGCCGCCGGA TTTTCCTGTT CCCGGACTCT CAGCTGGAAA TTCCGTTGGC GCGATTCCTG
TCCCGCGAGC TGGGAATGCA GCTGGTCGAG GTCGGAACGC CCTATCTGCA CCGCGAGCAT
CTCGCCGAAG AACTCAAGCT GTTGCCGCCC GACGTCCAGA TCACCGAAGG CCAGGACGTC
GATCTGCAGC TCGATCGTTG CCGGCTGGCG CGCCCCGATC TGGTGGTGTG CGGACTCGGT
CTAGCCAATC CGTTGGAAGC CGAAGGTATG ACGACGAAAT GGGCGATCGA ACTCGTGTTC
ACGCCGATCC AGGGGTACGA ACAGGCTTCT GACCTGGCGG AATTGTTTGC GCGTCCGCTG
GTGCGTCGCG CGAAACTGGT GGCCTGA
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| Protein sequence | MTVLAQGCDV APPNNLTKPV RHESGQREVF CGLTGIVWLH RKIQDAFFLV VGSRTCAHLI
QSAAGVMIFA EPRFATAIME EKDLAGLTDA NTELDRIVTQ LLTRRPDIKL LFLVGSCPSE
VIKLDLSRAA LRLSQTFSPG VRILSYSGSG IETTFTQGED ACLASLVPEL PAASGKDASL
LVVGSMADVV EDQFVRMFEA LGIGPVQFLP PRNSATLPSV GPNTKFLLAQ PFLADTAREL
ENRGATRLRA PFPLGVEGTT AWLRAAANAF AIDPALFDKV TQPARARAER ALDNYRKELA
GRRIFLFPDS QLEIPLARFL SRELGMQLVE VGTPYLHREH LAEELKLLPP DVQITEGQDV
DLQLDRCRLA RPDLVVCGLG LANPLEAEGM TTKWAIELVF TPIQGYEQAS DLAELFARPL
VRRAKLVA
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