| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1311 |
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| Symbol | |
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| ID | 3972513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1425395 |
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| End bp | 1426264 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924421 |
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| Product | cobalamin B12-binding |
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| Protein accession | YP_531192 |
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| Protein GI | 90422822 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.650213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATG GTACCGAGCA TCAACTCGCA ACGGGCTCCC GCATGGAGGG CATCGGTCCT
CCACATCAGA TTCAGCGAGC CCCGCCGGCC CCGATTTGGC GTTTCCGGCC CGCAGCGCCT
CCGCTCAGCA TGGTTCGCGC CATCAAGACC CAAATCATAC CGCGGATCGC CTGGGCCTTT
CGTGCAGCGC CCGAGCCGAA AACCGAGGCC GGCTCTGGAG AGCTGCAGAA GCTTGTGGCC
CTTCTCCAAG GTCAGGACGA GGCGGCGCCT TCGGCTTTCA TTGACGCGCT GATCGCAAGC
GGCACGCCGG TCGACACGAT CTTGTTGCAG TGGTTTGCCC CCGCCGCCCG GCTTCTCGGC
GACATGTGGG AAAAGGATAC CACTGACTTT GCCACTGTGA CGCTGGCGGT CGGCCGGATG
CAGCGGATCA TGCACCACCT CGGCGAGAGC TTTGCCAAGG ACGACTGCCG GGGCGCGGGG
GACGCGGCGT TGCTGACGAC CATTCCCGGC GAGCAGCACA GCTTCGGGCT GTCGATGGTC
GCGGAGTTCT TTCGCCGCGC GGGGTGGACT CTATGTACCG GTCCGTTTCA AACTCAGAAC
GAGTTGACGG CGCTGGTTCA GGACCGCTGG TTTGACATCG TCGGCTTCTC GGTGACTTCG
GACCGCAGGC TGGACGAATT GAAGCGAAGC ATTCGCGAGG TTCGCCGCGA ATCCCGCAAC
CCTCGGGTGG CAATCATCCT GGGCGGACCG ATCTTGCATA GCCACCCAGA GCTTGCGGCG
GCGGTCAGAG CCGATATGGT GATCGGCGAT GCGATCGCCG CCCCCGATCA GGCTCGTACG
CTCGTCGAAT CGATGAAGGG CCAAGTCTGA
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| Protein sequence | MGDGTEHQLA TGSRMEGIGP PHQIQRAPPA PIWRFRPAAP PLSMVRAIKT QIIPRIAWAF
RAAPEPKTEA GSGELQKLVA LLQGQDEAAP SAFIDALIAS GTPVDTILLQ WFAPAARLLG
DMWEKDTTDF ATVTLAVGRM QRIMHHLGES FAKDDCRGAG DAALLTTIPG EQHSFGLSMV
AEFFRRAGWT LCTGPFQTQN ELTALVQDRW FDIVGFSVTS DRRLDELKRS IREVRRESRN
PRVAIILGGP ILHSHPELAA AVRADMVIGD AIAAPDQART LVESMKGQV
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