| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1294 |
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| Symbol | |
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| ID | 3974012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1408522 |
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| End bp | 1410129 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924404 |
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| Product | chlorophyllide reductase subunit Y |
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| Protein accession | YP_531175 |
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| Protein GI | 90422805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02015] chlorophyllide reductase subunit Y |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG TTTTGCCACG CTATGCCGGA GCGATCGCCG ACTCGGTCGT CAATGACGAG
ATCGACGTCG ACGCCGCCAC CGAAGCGCAG GACGCCGCGG CGCCGGCGAT CAACGTCGCC
GCGACCAAGG CCGACGGCCT CGGCTGCCAT GCGGGTGCCG CCGAAATGAA GGCAGCGGCC
AATGCCGCCG GCAAGAGCGA CATTCTGGAT CGCTACGCCG CCGACTATCC GAAAGGGCCG
CACGACCAGC CGCAGAGCAT GTGCCCGGCG TTCGGCTCGC TTCGCGTCGG CCTGCGGATG
CGGCGCACCG CGACGATCCT GTCCGGCTCG GCCTGCTGCG TCTATGGCCT GACCTTCGTG
TCGCATTTCT ACGGCGCGCG CCGCACCGTC GGCTACGTGC CGTTCAATTC CGAAACGCTG
GTCACCGGCA AGCTGTTCGA GGACATCCGC GAAGCGGTGT TCAAGCTCGC CGACCCCGAG
CATTACGACA CGATTATCAT CACCAATCTC TGCGTGCCCA CCGCGTCCGG CGTGCCGCTC
GATCTGTTGC CGAACGAGAT CAACGGCGTG CGCATCATCG GCATCGACGT GCCGGGATTC
GGCGTGCCGA CCCATGCCGA GGCCAAGGAC GTGCTGGCCG GCGCGATGCT GGAATACGCC
CGCAAGGAAG TCGAGCAGGG TCCGGTGCAG GCGCCGCGCG GCGGCCGCAG CGAGCGGCCG
ACGGTGACGC TGGTCGGCGA AATGTTTCCG GCCGACCCGG TCGGCATCGG CATGATGCTG
GAGCCGCTCG GCCTTGCCGC CGGTCCGGTG GTGCCGACCC GCGAATGGCG CGAGCTCTAT
GCCGCGCTGG ATTGCTCGGT GGTGGCGGCA ATTCACCCGT TCTACAAGGC GAGCTTCCGC
CAGTTCGATC TCGCCGGCCG CAAGATCGTC GGCTCGGCAC CGGTCGGTCA CGACGGCACC
GAAGCCTGGC TCGAAGCGAT CGGCACCGCC TGCAACGTGT CGCGCGAAAA AATCGACGCC
GCCAAGAACC GCTTCCTGCC GATGATCAAG TCGGCGCTCG CCGCCAAGCC GATCAACGCC
CGCATCACCG TCTCCGGCTA TGAAGGCTCG GAGCTGTTGG TGGCGCGGCT CTTGATCGAG
AGCGGCGCGG ATGTGCCCTA TGTCGGCACC GCCTGTCCGC GCACCGAATG GTCTGACGCC
GATCGGCAAT GGTTGGAGGC CAAGGGCGCG CGGGTGCAGT ACCGCGCCTC GCTGGAGCAG
GACTACGCGG CGATCGACGA GTTCATGCCG CAGCTGGCGA TCGGCACCAC CCCGGTGGTG
CAGAAGGCCA AGCAGATGGC GATCCCGGCC TTGTACTTCA CCAACCTGAT CTCGGCGCGG
CCGCTGTTCG GCGTCGCCGG TGCCGGCTCG CTGGCGCAGG TCGTCAATGC GGCGCTCGGC
AATCAGGCGC GGTTCGACGA GATGAAGGAC TTCTTCGGCG AAGTCGGGCA GGGCTACGCC
GCCGGCGTCT GGGAAGACAC GCCGAAGGAC AACGTCCCGT TCCGCGAGAA GTACAAGAAG
CAGATCGAGG CGATGGCCAA GAAGCGTAAG TCGGAGGAGA TGATCTGA
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| Protein sequence | MTVVLPRYAG AIADSVVNDE IDVDAATEAQ DAAAPAINVA ATKADGLGCH AGAAEMKAAA
NAAGKSDILD RYAADYPKGP HDQPQSMCPA FGSLRVGLRM RRTATILSGS ACCVYGLTFV
SHFYGARRTV GYVPFNSETL VTGKLFEDIR EAVFKLADPE HYDTIIITNL CVPTASGVPL
DLLPNEINGV RIIGIDVPGF GVPTHAEAKD VLAGAMLEYA RKEVEQGPVQ APRGGRSERP
TVTLVGEMFP ADPVGIGMML EPLGLAAGPV VPTREWRELY AALDCSVVAA IHPFYKASFR
QFDLAGRKIV GSAPVGHDGT EAWLEAIGTA CNVSREKIDA AKNRFLPMIK SALAAKPINA
RITVSGYEGS ELLVARLLIE SGADVPYVGT ACPRTEWSDA DRQWLEAKGA RVQYRASLEQ
DYAAIDEFMP QLAIGTTPVV QKAKQMAIPA LYFTNLISAR PLFGVAGAGS LAQVVNAALG
NQARFDEMKD FFGEVGQGYA AGVWEDTPKD NVPFREKYKK QIEAMAKKRK SEEMI
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