| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1293 |
|---|
| Symbol | |
|---|
| ID | 3974011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1407501 |
|---|
| End bp | 1408496 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924403 |
|---|
| Product | chlorophyllide reductase iron protein subunit X |
|---|
| Protein accession | YP_531174 |
|---|
| Protein GI | 90422804 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR02016] chlorophyllide reductase iron protein subunit X |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.579367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCG TCCCCCAGGC CACCATGAAA GACGCGCTCC GGGCTGAAGC GGCGGTCGAG
CCGGAGGCTC CGGTGACGAC TCCTGTGACC AAGGAAACCC AGATCATCGC GATCTACGGC
AAGGGCGGCA TCGGCAAGAG CTTCACCCTC GCAAACTTGT CCTACATGAT GGCGCAGCAG
GGCAAAAAGG TGCTGCTGAT CGGCTGCGAT CCGAAGAGCG ACACCACCTC GCTGCTGTTC
GGCGGCAAAG CGTGCCCGAC CATCATCGAA ACCTCGTCGA AGAAGAAGCT CGCCGGTGAA
GAGGTCAAGA TCGGCGACGT CTGCTTCAAA CGCGACGGCG TTTACGCCAT GGAACTCGGC
GGCCCGGAAG TCGGGCGCGG CTGCGGCGGC CGCGGCATTA TTCACGGCTT TGAATTGCTG
GAAAAGCTCG GCTTCCATGA ATGGGGCTTC GACTACGTGT TGCTCGACTT CCTGGGCGAC
GTGGTGTGCG GCGGCTTCGG CCTGCCGATC GCCCGCGACA TGTGCCAGAA GGTGATCGTG
GTCGGCTCCA ACGATCTGCA GTCGCTCTAC GTCGCCAACA ATGTCTGCTC GGCGGTGGAA
TATTTCCGCA AGCTCGGCGG CAATGTCGGC GTCGCCGGCA TGGTCATCAA CAAGGATGAC
AACACCGGCG AAGCCCAGGC GTTCGCCAAG GCTGCCGGCA TTCCGGTGCT GGCGGCGATT
CCGGCCGACG ACGGCATCCG CAAGAAGAGC GCGAACTACG AAATCATCGG CTTGCCGGGC
GGCGAATGGG GGCCCTTGTT CGAAGAGCTT GCCAAGAATG TCGGCCTGGC GCCGCCGGTA
CGTCCGACGC CGCTCAGTCA GGACGGTCTG CTCGGCCTGT TCACCAGCGA CGTCACTGGG
CGCGACGTGG TGCTCGAACC CGCCACCATG GAAGACATGT GCGGCGTCGC CGTGCTCGAC
AAGCCGTCCC TCGAAGTCGT TTACGACGCA GCGTGA
|
|---|
| Protein sequence | MNVVPQATMK DALRAEAAVE PEAPVTTPVT KETQIIAIYG KGGIGKSFTL ANLSYMMAQQ
GKKVLLIGCD PKSDTTSLLF GGKACPTIIE TSSKKKLAGE EVKIGDVCFK RDGVYAMELG
GPEVGRGCGG RGIIHGFELL EKLGFHEWGF DYVLLDFLGD VVCGGFGLPI ARDMCQKVIV
VGSNDLQSLY VANNVCSAVE YFRKLGGNVG VAGMVINKDD NTGEAQAFAK AAGIPVLAAI
PADDGIRKKS ANYEIIGLPG GEWGPLFEEL AKNVGLAPPV RPTPLSQDGL LGLFTSDVTG
RDVVLEPATM EDMCGVAVLD KPSLEVVYDA A
|
|---|
| |