| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1271 |
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| Symbol | |
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| ID | 3973029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1386840 |
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| End bp | 1387625 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924381 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_531152 |
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| Protein GI | 90422782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.104135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.640499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACC GCCTGATCTT TACCGGACAA TTGCTGTTCA CCCTGCTGGT CGCCGGCTTC
CTGGTGGTAC CGGCGCTGCT GTCGATCTCG GCCGGGGTCA CGGAGAACTA CTTCCGCGGC
ATCTCCTCGG GCCTGACGCT GCGGTGGGTG ATCCAAGTGT TCGATCTGTA TTCGGACACG
ATCCTGCTGT CGTTCGTGAT CGCATTCGCG ACGCTGGCGG TGACGCTGCT GGTCGGGGTG
CCTGCCGCCT ATGCGCTGCA TGTGCGCGGC GGTACGCTGT CGCGGCTGAT CGAGGAGATC
ATCACGCTGC CGCTGGCGAT TCCCGGCCTC GCCATCGCGC TGGCGCTGCT GCTCGCCTAT
GGCGGGTTCG GCGGCTTCCG GCGCTCCTGG CTGTTCATCC TGGTCGGCCA TGTGGTGTTC
ACCATGCCGT TCATGGTGCG CTCGGTGATG GCGGTGTTCG CCACCATCGA CATCAAGACG
CTGGATGAGG GCGCGGCGTC GCTGGGGGCG GCGCCGTGGC GGCGCTTCGT CGATATCATC
GTGCCGAATG CGCGGCCGGG GATTCTCGCC GGCGCGCTGA TGGTGGTGAC GCTGTCGCTC
GGCGAGTTCA ACCTGACCTG GATGCTGCAC ACGCCGATGA CCAAGACGCT GCCGGTCGGT
CTCGCCGACA GCTACGCGTC GATGCGGCTC GAGGTCGCCT CCGCCTACAC GCTGATTTTC
TTCATCATGA TTGTCCCGCT GCTGGTGGCG ATGCAGATGT TTGCCGACGA GGGACGTGAC
AGATGA
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| Protein sequence | MRDRLIFTGQ LLFTLLVAGF LVVPALLSIS AGVTENYFRG ISSGLTLRWV IQVFDLYSDT
ILLSFVIAFA TLAVTLLVGV PAAYALHVRG GTLSRLIEEI ITLPLAIPGL AIALALLLAY
GGFGGFRRSW LFILVGHVVF TMPFMVRSVM AVFATIDIKT LDEGAASLGA APWRRFVDII
VPNARPGILA GALMVVTLSL GEFNLTWMLH TPMTKTLPVG LADSYASMRL EVASAYTLIF
FIMIVPLLVA MQMFADEGRD R
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