| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1216 |
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| Symbol | |
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| ID | 3969093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1330430 |
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| End bp | 1331317 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924327 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_531098 |
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| Protein GI | 90422728 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.138316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA TGACCGACAC CGCGCTGCAG AGCGCGCCTT CCACCCCCGC GCGCGGCTAT
TGGGCCACCG TCGGCCGCCG GCTCCGCCGC GACAAGGTGG CGATGGCCTG CGCGCTGATC
CTGTTGTTGA TCTTCGTCTC GGCGCTGGTG GCGCCGTGGC TCGGGCTTGC CGATCCCTAT
CAAGGCTCGA TGATCCGCCG CTTGAAGCCG ATCGGCACGC CGAACTACTT GCTCGGCACC
GACGAACTCG GCCGCGACAT GCTGGCGCGG CTGGTCTATG GCGGCCGGCT GTCGCTGCTG
ATCGGCATTC TGCCGGTGGT GCTGGCATTC GGCATCGGCA CCTCGCTCGG CCTGGTCGCC
GGCTATGTCG GCGGCAAGCT CAACACCGCG ATCATGCGCA CCGTCGACGT GTTCTACGCG
TTTCCCTCGG TGCTGCTGGC GATCGCGATC TCCGGCGCGC TCGGTGCCGG CATCACCAAT
TCCATCGTGT CGCTCACCGT GGTGTTCGTG CCGCAGATCA CCCGGGTCGC GGAGAGCGTC
ACCACCGGGG TGCGCAACAT GGATTTCGTC GAGGCGGCGC GGGCGTCGGG CGCCGGCGCC
TTCACCATCA TGCGGGTGCA CATGCTGGGC AACGTGCTGG GGCCGATCTT CGTCTACGCC
ACCGGATTGA TCTCGGTGTC GATGATCCTC GCCGCCGGCC TGTCGTTCCT CGGTCTCGGC
ACCAAGCCGC CGGAGCCGGA ATGGGGCTTG ATGCTGAACA CGCTGCGCAC CGCGATCTAC
GTCAACCCCT GGGTCGCAGC CTTGCCCGGC GCGATGATCT TCGCGGTCTC GATCTGCTTC
AACCTGCTCA GCGACGGTAT GCGCAGCGCG ATGGACATCA GGAATTGA
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| Protein sequence | MTVMTDTALQ SAPSTPARGY WATVGRRLRR DKVAMACALI LLLIFVSALV APWLGLADPY
QGSMIRRLKP IGTPNYLLGT DELGRDMLAR LVYGGRLSLL IGILPVVLAF GIGTSLGLVA
GYVGGKLNTA IMRTVDVFYA FPSVLLAIAI SGALGAGITN SIVSLTVVFV PQITRVAESV
TTGVRNMDFV EAARASGAGA FTIMRVHMLG NVLGPIFVYA TGLISVSMIL AAGLSFLGLG
TKPPEPEWGL MLNTLRTAIY VNPWVAALPG AMIFAVSICF NLLSDGMRSA MDIRN
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