| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1215 |
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| Symbol | |
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| ID | 3969092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1329337 |
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| End bp | 1330425 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924326 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_531097 |
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| Protein GI | 90422727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TCCTTGACCC GCTCGACGCA ATCGAAAAAC TGGAACCGAT CGAAGACATC
GGCGGCGCCG CGCAACCGCT ATTGAAGGTC AACGGCCTCA CCAAGCATTT CCCGGTGCGC
GGCGGGCTGT TTGCGCCGAG CAAGACGGTG CGCGCGGTCG ACGACGTGTC GTTCGCCATC
GCCAAGGGCG AGACGCTCGG CATCGTCGGC GAATCCGGCT GCGGCAAGTC GACCACCGCG
CGCCTCTTGA TGCATCTGAT GCCGACCACC GGCGGCGAGA TCATCTTCGA CGCCCGCCAG
GTCGGCCGCC AGCTGTCGTT GCGCGAATTG CGCCGCGGCA TGCAGATGGT GTTTCAGGAC
AGCTACGCCT CGCTCAATCC GCGCCTGACC ATCGAGGAGT CGATCGCGTT CGGCCCCAAG
GTACACGGCA TGGACGACGC AGCCTCCCGC ACGCTGGCGC GCGAGCTGCT CGGCAAGGTG
GGCTTGCGCC CGGAGAATTT CGCCAACCGC TATCCGCACG AGATTTCCGG CGGCCAGCGC
CAGCGCGTCA ACATCGCCCG CGCACTGGCG TTGTCGCCGC GCCTCGTGAT CCTCGACGAG
GCGGTGTCGG CGCTCGACAA GTCGGTCGAG GCGCAGGTGC TCAACCTGTT GGTCGACCTG
AAGCGCGAAT TCGGCCTGAC CTATCTGTTT ATCAGCCACG ACCTCAATGT GGTGCGCTAT
ATCTCCGACC GCGTGCTGGT GATGTATCTC GGCGAAGTGG TCGAGGTCGG CCCGGTCGAC
GAGGTGTGGG ATCAGCCGGC GCATCCCTAT ACGCGGGCGC TGTTGGCGGC GATGCCGTCG
TCGGATCCCG ACCGCCGCAC GCAAGTGCCG CCGATCACCG GCGATCCGCC GAACCCGATC
GATCCGCCGG CCGGTTGCCG GTTTCATCCG CGCTGCCCGT TCGCCGAGCC GTTGTGCGAC
GGCGCCACGC CGAAGCTCAC CGAACTCAAT CCATCGGGCC ATCAGGCCGC CTGCTACATG
GCGATCCCCG GCTCGGGACA CAGCCGCGCG CCAGCCAAGG AAGTACAAAA CAATGTCGAC
CAAACCTGA
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| Protein sequence | MTDILDPLDA IEKLEPIEDI GGAAQPLLKV NGLTKHFPVR GGLFAPSKTV RAVDDVSFAI
AKGETLGIVG ESGCGKSTTA RLLMHLMPTT GGEIIFDARQ VGRQLSLREL RRGMQMVFQD
SYASLNPRLT IEESIAFGPK VHGMDDAASR TLARELLGKV GLRPENFANR YPHEISGGQR
QRVNIARALA LSPRLVILDE AVSALDKSVE AQVLNLLVDL KREFGLTYLF ISHDLNVVRY
ISDRVLVMYL GEVVEVGPVD EVWDQPAHPY TRALLAAMPS SDPDRRTQVP PITGDPPNPI
DPPAGCRFHP RCPFAEPLCD GATPKLTELN PSGHQAACYM AIPGSGHSRA PAKEVQNNVD
QT
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