Gene RPC_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1185 
Symbol 
ID3969140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1292351 
End bp1293577 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID637924296 
Productmetallophosphoesterase 
Protein accessionYP_531067 
Protein GI90422697 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA GCTTCATTCA TGCCGCCGAT CTCCACATCG ACAGTCCGCT CGCCGGACTA 
AGCCTGAAGG ACCAGGCGGT GGCGGCGCGT TTCGCGCAGG CCGGCCGGCG CGCGGTCGAG
GCGCTGATCG AACAGACCAT CGCCAGCAAG GCGGCGTTCC TGATCATCGC CGGCGACGTG
TTCGACGGCG ATTGGAAGGA CGTCTCGACC GGGCTGTTTT TCGTCCGCGC CGTCAGCGCG
CTCGATCGCG CCGGCATCCC GGTGGTCATG GTCAAGGGCA ATCACGATGC CGCCAGCGTG
ATGTCGCGCG ACCTGCCTTA TCCCGACAGC GTCACCGTGT TCGGCTCCGG CAAGGCCTCG
ACCGTCACGC TCGAAGCGCA TCGCGTGGCC TTGCATGGCC GCAGCTTTCC GAACCGGCTC
ACCGCGGATT TTGTCGAGAG CTATCCGCCG CGCCGCGACG GCTGGCTCAA TATCGGCGTG
CTACACACCT CGCTCGACGG CACCCGCGGC CACGAGGGCT ACGCGCCGTG CAGCGTCGAT
GACCTCAAGC GCTTCGGCTA TGATTATTGG GCGCTCGGCC ACGTCCACGC CGCCGAGATC
GTCAGCCGCG ATCCGTGGAT CGTCTATCCC GGCAATCTGC AGGGCCGCAG CGTGCGCGAG
ACCGGCGCCA AGGGCGCGGT GCGCGTCACC GTCGAAGACG GCCGCATCGT CGAGGTGACG
CCGTTGGCGC TGGACGGCGC GCGCTGGGCG CAGTTGACGC TTGACGTCGC GGGGATCAGC
AGCGAGGACG AGATGCTGGC GCGCTGCCGC GCCGCGCTCG CCGACGCGCA GGCGCAGAGC
GAGGGCCGGC CGCTGGCGGC GCGTATCACG CTCACCGGCG CGACCTCGCT GCACAATCAT
CTCGTCGCGC GGCGCGAGAC GTTGCAGGAC GAACTGCGCG CCATCGGCTT TCAGCTCGGC
GCCGAATGCT GGGTGGAACA GCTCAAGGTC AGAACCAGCC TCCCGGTGCT CACGGGCGCG
GCGATGTCTG CCGCCGATGC GCTCGATGTC GATCAGCTGC TGCGCGAGGC GGCTTCCGAT
CCGGAATTCG CCACTGTGCT GGCCGAGCTC ACCGACACCA TCAAGGCGAA GTTGCCGAAG
GATCTGCACG ACGAGCTCGA TCGTTCGGAG GCATTGACGC GCTTGGCCGA CGATGCGCGC
GCGTTGCTCG CCGGAGACGT CGCGTGA
 
Protein sequence
MRFSFIHAAD LHIDSPLAGL SLKDQAVAAR FAQAGRRAVE ALIEQTIASK AAFLIIAGDV 
FDGDWKDVST GLFFVRAVSA LDRAGIPVVM VKGNHDAASV MSRDLPYPDS VTVFGSGKAS
TVTLEAHRVA LHGRSFPNRL TADFVESYPP RRDGWLNIGV LHTSLDGTRG HEGYAPCSVD
DLKRFGYDYW ALGHVHAAEI VSRDPWIVYP GNLQGRSVRE TGAKGAVRVT VEDGRIVEVT
PLALDGARWA QLTLDVAGIS SEDEMLARCR AALADAQAQS EGRPLAARIT LTGATSLHNH
LVARRETLQD ELRAIGFQLG AECWVEQLKV RTSLPVLTGA AMSAADALDV DQLLREAASD
PEFATVLAEL TDTIKAKLPK DLHDELDRSE ALTRLADDAR ALLAGDVA