Gene RPC_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1155 
Symbol 
ID3969512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1257530 
End bp1258369 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID637924265 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_531037 
Protein GI90422667 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.712198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGC TGCCGCAAGA CTGTTTGCCC CGGCTCGCCG CCAAAAACGC CTCGGCTCTC 
CGAGGACCCC GCAAAGGATA CCGCATGACC GGCCACCTGA CCGTCGTCGA TACCGCCGCC
ACCCGCATCA TCACCCTGAC CCGGCCGGAC AAGAAGAACG CGCTGACCCA AGACATGTAT
CGGGCGATGA GCGCGGCGAT CAATTCCGCG CAAGCCGACG CCGCGATCCG CTGTCTGTTG
ATCGAAGGCT CGGGCGGCGT GTTCACCTCG GGCAACGACC TGGAGGATTT TCTCAACGCC
GGCAGCGACG GCGCCGGCTT GCGCGGCTCC GAGGCCACGA CCTTTCTGCA CGCGCTTGCT
AACAACGAGA AGCCGCTGCT GGCTGCGGTC GAGGGCGCGG CGATCGGCAT CGGCACCACG
CTGCTGCTGC ACTGCGACTA CGTGATCGCA TCGAGCGACG CCAGCTTCGC CACCCCGTTC
GTGCCGCTCG GCCTGGTGCC GGAAGGCGCC TCCAGCCTGT TGGCGCCGCG CGCGCTCGGC
CATCACCGCG CCTTTGCGCT GTTGGTGATG GGCCGCAAGC TCGACGCCAA CGACGCCCGC
GACGCCGGCT TCGTCAACGA GGTGGTGCCG GCGGAGCAGC TCGCCGCGCA AGCGCGCAAG
GTCGCCGCAG AAATTGCCGC GCTGCCGGTC GAAGCGGTGG CGATCTCGCG GCGCTTGTTG
AAGCCGCAGC CTTCCGAACT GATCGACCGC ATCGATCACG AAAGCAAGCT GTTCGGCGAA
CGCATGACCT CGGAGGAAGC GATCGCGGCG TTCAAGAAGT TCTTCGACCG CAAGAAGTGA
 
Protein sequence
MAALPQDCLP RLAAKNASAL RGPRKGYRMT GHLTVVDTAA TRIITLTRPD KKNALTQDMY 
RAMSAAINSA QADAAIRCLL IEGSGGVFTS GNDLEDFLNA GSDGAGLRGS EATTFLHALA
NNEKPLLAAV EGAAIGIGTT LLLHCDYVIA SSDASFATPF VPLGLVPEGA SSLLAPRALG
HHRAFALLVM GRKLDANDAR DAGFVNEVVP AEQLAAQARK VAAEIAALPV EAVAISRRLL
KPQPSELIDR IDHESKLFGE RMTSEEAIAA FKKFFDRKK