Gene RPC_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1122 
Symbol 
ID3969556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1222674 
End bp1223162 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID637924233 
Producthypothetical protein 
Protein accessionYP_531005 
Protein GI90422635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTG AACAGCGGCA CAATGTCCCG GTCCGGGGCG ACGAGCGGTC CCCCGTTGAG 
GCGACGGACG ATGCGACGGT GGCGGCACCG CCGTCCCCCG CCCTCGACGA AGAGCCGCCG
GCGCCGGGCC AGTGGCTTGG CACAAGCAGC AGCACGCTGA ACGCCATCGA GCGGCTCAAT
GCGGCGATCG ACGAGGAAAC CGAACGGCTG GAAATCAGGG TGTCGGTGGA TCTCGAAGAG
TCCAGCCGGC GCAAGAATCA CGGCCTGCTC GAACTGACGC GGGCGATGCG GCTGGCGCAG
GGCGCCGCCG TCGATCCGCG CGTGGTGCCG CATCTGGCGC GGCTTCGCGC CAGCCTGGTC
AGGAATCAGG CGGCGCTGCA GATTCACCTC GACGCGGTTC GCCAAGTCTC CGCCATCATC
GCCAGATCGA TCCAGGAGGT GGAATCCGAC GGCACCTATT CGGCGGCGGG GTCACGCCGA
TGCAAATGA
 
Protein sequence
MDSEQRHNVP VRGDERSPVE ATDDATVAAP PSPALDEEPP APGQWLGTSS STLNAIERLN 
AAIDEETERL EIRVSVDLEE SSRRKNHGLL ELTRAMRLAQ GAAVDPRVVP HLARLRASLV
RNQAALQIHL DAVRQVSAII ARSIQEVESD GTYSAAGSRR CK