Gene RPC_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1112 
SymbolflgK 
ID3969546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1214813 
End bp1216285 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content66% 
IMG OID637924223 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_530995 
Protein GI90422625 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.701676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA CCGTCGCGCT CAACTCGGCC CGGTCGTCGC TGATGGCGGC GGGCGCCCAG 
GCCGCCGCGG TCTCCCGCAA CATCGCCGGC GCCAAGCAGG ACGGCTATTC GCGCAAGAAC
GTGCTGCTGG CGACGATGCC GGGAAGCGGC GTGTTCGTCG AAGGCATCCA ACGCGCCGCC
AGCGCGGGAC TGTTCAACAA CGTACTGAAG GCGGCGTCGA CCTCGGCAAT GCAGGATACG
CTCTACAACG GGCTGCAGAA GATCGCGGCG GCGACGATCG ACGATCCGGA GCTCGACCAA
TCGCCCGCTG CGCAACTCGC CAAGCTGCGC ACCGCGCTGC AGCAAAGCGC GACCGCGCCC
GACAATGTCA CGCTGGCGCA AGCCGCCGTG ACGGCTGCCA AGGGTGTCGC CGCCTCGCTC
AACGACGCCA CCAAGACCGT CCAGGGGGTG CGGCTCGATG CCGACGCCGA GCTAGAGACC
TCGGTCGCGA CCATCAACCA GCTGCTGGCG CAGTTCGAAA CGGTCAACAC CTCGATCGTG
AAAGGCACCA TCACGGGGGC CGATACCACC GACTATCTCG ACCTGCGCGA CAGCATCTTG
TCGAAGCTCT CGCAGGAGGT CGGCATCACC GTGTCGACCC GCGCCAACAA CGACATGGTG
ATCTACACCG ATTCCGGCGT CACCATGTTC GAGAAGACCG CGCGCTCGGT GAGCTTCGAT
CAGACCTATG GTTTCTCGCC GACGACCACC GGCAACGCGG TCTATATCGA CGGCGTGCCG
GTGATCGGCG CCTCCGCGGT GATGCCGGTG CAATCCGGCA AGCTTGCCGG CCTCGCCGCG
CTGCGCGACG ACACCACGGT GTCCTATCAG AACCAGCTCG ACGAGATCGC GCGCGGCCTG
GTCGAGGCTT TCGCGGAACG CGATCAGAGC GGGGCGTCAC TGCCCGACGT GCCGGGGTTG
TTCACCTATC CGGGCGCGCC TGCGATCCCG GGCTCCGGGG TGATCGCGGT CGGACTCGCG
GGAACGATCA CGGTGAGCGC ATCGGTGGAT CAGAGCGTCG GCGGCGATCC GACGCGGCTC
AGAGACGGCG GCATCTCGGG CAACCCCGCC TACACCTACA ACACCACCGG CCATGCCGGC
TATTTCGCTC GTCTGCAGCA AATGGCCGAC GGTCTCACCC AAAGCCGCGC GTTCGATCCG
GCGGCATTGG CCAAGCCCAA CACCGGCCTG ATCGACTTTG CCGGATCGTC GGTGAGCTGG
CTGGAATCGC AGCGCAAGGG CGCCAGCGAC GAATCGACCT ACAGCCAGAC CCTGTTGGAG
CGCAGCGCCG ACGCCCTCAG CAACGTCAAC GGCGTCAATA TGGACGACGA AATGACCTTC
ATGCTGCAGG TCGAGCGAAC CTATTCGGCC TCGTCGAAGC TGATTTCGGC GGTGGACCAA
ATGTTGAAAG ATCTCCTGGC GGCTGTGGGG TAA
 
Protein sequence
MTLTVALNSA RSSLMAAGAQ AAAVSRNIAG AKQDGYSRKN VLLATMPGSG VFVEGIQRAA 
SAGLFNNVLK AASTSAMQDT LYNGLQKIAA ATIDDPELDQ SPAAQLAKLR TALQQSATAP
DNVTLAQAAV TAAKGVAASL NDATKTVQGV RLDADAELET SVATINQLLA QFETVNTSIV
KGTITGADTT DYLDLRDSIL SKLSQEVGIT VSTRANNDMV IYTDSGVTMF EKTARSVSFD
QTYGFSPTTT GNAVYIDGVP VIGASAVMPV QSGKLAGLAA LRDDTTVSYQ NQLDEIARGL
VEAFAERDQS GASLPDVPGL FTYPGAPAIP GSGVIAVGLA GTITVSASVD QSVGGDPTRL
RDGGISGNPA YTYNTTGHAG YFARLQQMAD GLTQSRAFDP AALAKPNTGL IDFAGSSVSW
LESQRKGASD ESTYSQTLLE RSADALSNVN GVNMDDEMTF MLQVERTYSA SSKLISAVDQ
MLKDLLAAVG