Gene RPC_1098 details

Gene Information

• Locus tag: RPC_1098
• Symbol: flgA
• ID: 3969571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 1201368
• End bp: 1201853
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637924209
• Product: flagellar basal body P-ring biosynthesis protein FlgA
• Protein accession: YP_530981
• Protein GI: 90422611
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1261] Flagellar basal body P-ring biosynthesis protein
• TIGRFAM ID: [TIGR03170] flagella basal body P-ring formation protein FlgA

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.368798
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCTTGA TGCGCGCCAT ATCCACCCTC GTTCGACGGG TCTGGTCGGC GGCGTTCGTC 
GCCACCGTGA TCTCCGCGAG CGCGCTCGCG GAGGAGCCGG CGCGCTTTCC GGTTCCCGCC 
ACGGTGATCT ACCCGGGCGA CTTGATCAAA GACGAGATGA TTATCGATCG CAGCTTCGCG 
CCGAACCTGC CGGGCGTTGC CGCCTTCGTC GGCGACCGGC CGGCGGTGGT CGGCCGGATC 
GCGCGGCGCA CGTTGCTGCC CGGGCAGTTG ATCCCGATCA ACGCCCTCGA GGAGCAGAAG 
CTCGTGTCGC GCGGCAGTGT CGTCAAGGTC GTCGTCGAGG ACGGGTCGCT GTCGATCGTG 
ACCTACGGCT CTTCGCTGCA GGCCGGCAGC CCCGGGTCGA TGATCCAACT TCGAAATCTC 
GATACCGGCG TGACCATCCG AGGGATCGTG CAGCCGGACG GGTCAGTGCG GATTCAAAAC 
GGATGA 

 

Protein sequence

MALMRAISTL VRRVWSAAFV ATVISASALA EEPARFPVPA TVIYPGDLIK DEMIIDRSFA 
PNLPGVAAFV GDRPAVVGRI ARRTLLPGQL IPINALEEQK LVSRGSVVKV VVEDGSLSIV 
TYGSSLQAGS PGSMIQLRNL DTGVTIRGIV QPDGSVRIQN G