Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1049 |
Symbol | |
ID | 3969620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1151770 |
End bp | 1153257 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924160 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_530932 |
Protein GI | 90422562 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCA CGGCCGCGCT GTCCTGTTAC GCGGCGCGCA CGCCGGACCG CGACGCGTTG GTCTTCGAAG ACCAGCGGAT CTCTTGGGTG CATCTCAACC GCGAGATCAA CCGGCTGGCG GGGTTCATTG TCGCCACCAC CCCCGCGGGC GGCAGCGTTG CCCTTCATCT GCCCACCAGC CCCGCGCTGG CTCTGCTGTT TCTGGCGGTC GCGCGGGCCG GGCGCGAAGC GCAGGTGTTC GATCCGGACT GGCCAATCGA GATGACCCGC GCGATCCGAG CGCGGCTGTC ACCCGACCTG TTTGTCAGTT CTGACGCTCG CTTCAGCGGC AGCAACACCG TGATCGTTGC GGACCCGATG ATTGCGTTCA TGCAGGTTGT GCCGGCGCTC GGCGTGTCGG CCCCCGCGCA CTCAGGCGCC GAGCCGGATG CCATGCTGCC CTTCTATGTC GGCTTCACAT CCGGATCGAC AGGCCTGCCA AAAGGGTACC GCCGCCACCA TCGATCGTGG ACCGAGAGCT CTCGCCACGA CGCACTGGAA TTCGGAATCA GTTCCGACGA CGTGATCCTC GCGCCGGGAA CGCTGACCCA TTCGTTGTTT CTTTATGCTC TGGTGCATGG GCTTAATTCC GGCGCCCGGG TCGTGCTCTG CAGGCGGTTC CGGCCCGACG CCGTGGTACG CCTCATTGAA GCAGAGCGTG TCACGGTGCT GTATGGCGTG CCGACGCAGC TACAACTGAC GGTCAAGGCG GCTGGTGACC AGGTTCTTGG CTCGATGCGC TGGATTCTCT CGTCGGGAGC CAAGTGGCCC ATCGGGGAAC GTGAGCCGTT GCGACGGCTG TTTCCAAACG CGCGGTTTGC CGAGTTCTAC GGTGCTTCAG AGACCGGCTT CATGACGGTC GCCAAAGCCG ACGAAGGCGC TCCAGAGACG TCTGTCGGCC GCGCCTTCTC GGGAGCCGTG GTGACGATCC GGGATCGAGC CGGCCGGCCA ATTCCACAGG GAAAGACCGG CTATGTGTTT GTCGCGAGCC CGTTTCTAAT TATGAACTAC GCTTGCGGTG AAGATTCCGA CTTGCTCCAC TATGGTGAAG AAGTCTCGGT GGGGGACATC GGCTTTCTCG ACCCGCAGGG CTTCCTGCAT CTGGTCGGCC GCGCGCGCCG AAAGATCGTC ACCTCGGGCA AGAACGTTTA CCCCGAGGAG ATCGAACGGG TGTTGGAGCA GCACCCGATG GTGACGGCCG CGGCGGTTCT CAGCGCCCCC GACCGAAGCC GCGGCGAGCG GCTGATCGCG CTCGTGCAGA TACGCACGGA TGCGGTCGTC ACATCTGCAG ATCTCATCGC TTACCAGCGC AAGGCATTGC CGCTCTACAA GGTGCCGCGG GTCTATGCGA GCGTCGCGGA GTGGCCGTTG ACGCGGTCCG GCAAAACCGA CTTTGAAAGG CTGCGGCAAG CCTGGATGAC GGGCGCGATC ACCGGGAGGC TGCCATGA
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Protein sequence | MSITAALSCY AARTPDRDAL VFEDQRISWV HLNREINRLA GFIVATTPAG GSVALHLPTS PALALLFLAV ARAGREAQVF DPDWPIEMTR AIRARLSPDL FVSSDARFSG SNTVIVADPM IAFMQVVPAL GVSAPAHSGA EPDAMLPFYV GFTSGSTGLP KGYRRHHRSW TESSRHDALE FGISSDDVIL APGTLTHSLF LYALVHGLNS GARVVLCRRF RPDAVVRLIE AERVTVLYGV PTQLQLTVKA AGDQVLGSMR WILSSGAKWP IGEREPLRRL FPNARFAEFY GASETGFMTV AKADEGAPET SVGRAFSGAV VTIRDRAGRP IPQGKTGYVF VASPFLIMNY ACGEDSDLLH YGEEVSVGDI GFLDPQGFLH LVGRARRKIV TSGKNVYPEE IERVLEQHPM VTAAAVLSAP DRSRGERLIA LVQIRTDAVV TSADLIAYQR KALPLYKVPR VYASVAEWPL TRSGKTDFER LRQAWMTGAI TGRLP
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