Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1041 |
Symbol | |
ID | 3969651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1142487 |
End bp | 1143281 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924152 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_530924 |
Protein GI | 90422554 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCCCG ACAACCTGCG CTACCGAGAT GCGCCTGCCC GGCGCGGGGC GATCATCGAC CAGCTCAAAA ATCTTGGTTT CCTCACCATC GGCGAGGTCG CGAAAGAGTT GGGGGTGTCG GAAATGACGG TGCGGCGCGA TGCGCGACGC CTGCACGAGG AAGGTCGGCT GATTGCGTTG CGTGGCACGT TGCGACTGCC GAGCTCGCAC GACGAATCCG AAACGGAATA CCAACGCCGC GCCGCAGCTG CGACCACCGC GAAGGAAATG GTCGGACGGA TCGCCGCCAG CGAGGTGCTG CCGGGCGATG TGATCGCCAT CGACGCCGGC ACCACGGCGT TTCAGGTCGC CCGCGCGTTG CCGGAGGATT TCGACGGCAC CGTCGTCACC CATTCGATTC CGGTGCTCGA TCTCTTGATC GATCGGCCGA TGACCAAGAC CATCGCGCTG GGCGGCGACC TCTACCGGCC GAGCCGCGCG CTGGTCGGCT CCTTTACCGT GGAATGCGCG CAACGCCTGA GCGTGCGGAC CTTCTACATG GGCGCCGCGG CCGTGGACGA GCGGGGTGTG TATGCGTTGG GCGACGTGGA GCGCCTGGTC AAGCAAACCC TGATGAGCAT TGCAGATCGC GTCGTACTGG TGATCGACAA CCGCAAATTC GACGTCAAGG CGCCAGTTTT CATGTGTGAT TGGAGCCGTT TTTCCCTCGT CGTCTCCGAC CAGGTTCCGC CGGACCAGAT CACTGCGCTG CTGCGTCAGA AGAACATCCA AATACAGGTC GCCAGCGAAG GATAA
|
Protein sequence | MAPDNLRYRD APARRGAIID QLKNLGFLTI GEVAKELGVS EMTVRRDARR LHEEGRLIAL RGTLRLPSSH DESETEYQRR AAAATTAKEM VGRIAASEVL PGDVIAIDAG TTAFQVARAL PEDFDGTVVT HSIPVLDLLI DRPMTKTIAL GGDLYRPSRA LVGSFTVECA QRLSVRTFYM GAAAVDERGV YALGDVERLV KQTLMSIADR VVLVIDNRKF DVKAPVFMCD WSRFSLVVSD QVPPDQITAL LRQKNIQIQV ASEG
|
| |