Gene RPC_0970 details

Gene Information

• Locus tag: RPC_0970
• Symbol: dnaG
• ID: 3969694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 1064016
• End bp: 1066058
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637924086
• Product: DNA primase
• Protein accession: YP_530859
• Protein GI: 90422489
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0143224
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTTCA CCCCGCAATT TCTCGACGAA CTGCGCGCCC GGCTTCCGGT TTCGGAAGTG 
GTTGGCCGCC GCGTGAAATT GAAGAAGGCG GGGCGGGAGT GGAAGGGGCT GTCGCCGTTC 
CAGCAGGAGA AATCGCCGTC GTTCACGGTG AACGACCAGA AGGGATTTTA TCACGACTTC 
TCGTCGGGCA AGCACGGCGA CATCATCAGC TTCGTGATGG AGACCGACGG CTGCGGCTTC 
ACCGAGGCGG TGGAGCGGCT GGCGCAGATG GCAGGCGTCC CGCTGCCGGC GGTGACGCCC 
GACGCCGCGC GGCAGGAGCA ACGCCGCAAA TCGCTCTACG ACGTGATGGA CCTCGCCGCA 
AAATTCTTCG CCGACACCTT GGCGGCGCGG CAGGGCGCCC GCGCCCGCGG CTATCTCGCC 
GACCGCGCGA TGTCGCCGGC CACGCAGTTG AAATTCCGCA TCGGTTATGC GCCCGGCGAG 
CGCTTCGCGC TGAAGGAGCA TCTCGGCAAG CTCGGCATTC CGGTCGAGGA CATGGTCGAG 
GCCGGGCTGC TGATCTCGGG CGAAGACATC CCGGTGCCGT TCGATCGGTT CCGCGACCGG 
GTGATGTTTC CGATCGCCGA CGTGCGCGGC CGGGTGATCG CGTTCGGCGG CCGCGCGCTG 
GAAAAGGACG TTCCGGCGAA GTACCTGAAT TCGCCGGAAA CCCCGCTGTT TCACAAGGGC 
GACAACCTCT ACAATCTGGC GGTGGCCCGC GCTGCGGCGC ATGACGGCGC GCCGCTGATC 
GTGGTCGAAG GCTATGTCGA CGTCATCGCC ATGGTCGGCG CGGGCTATGC CGCCACCGTG 
GCGCCGCTTG GCACCGCGCT CACCGAAAAC CAGCTGCAGC TGTTGTGGAA GATGGCCGAC 
GAGCCGATCC TGTGCTTCGA CGGCGACAAG GCCGGGCAGA AGGCGGCGTG GCGCGCAGCC 
GACATGGCGC TGCCGCATCT CGCCCCCGGC AAGAGCCTGC GCTTTGCGCT GTTGCCGGAA 
GGCCAGGACC CCGACGATCT GGCGCGTTCC GGCGGCCGCG CCGCGATCGA CGAGGTGATC 
GGCTCGGCCC GCGGCCTCGC CGACGTGTTG TGGACCCGCG AGATCCAGAG CGGCAGCTTC 
GCCACGCCGG AGCGCCGCGC AGCACTCGAG GCGCGGATCA ACGAACTCAC CAACGGCATT 
CGCGACGAGG TGCTGCGGCG CTATTATCGC CAGGACATGG CGGAGCGGCT GCGATCGGCG 
TTCGCGCCGC AGGGCGGCTT CGGCGGCCGC GGCGGCTACG GCCGCGGCGG GCCGCGCGGC 
GGCGGCGGCG GCGGCTTCGG CGGCGAATCA GGCCGCGGCT TTCCGCAACG TTCTGCTTTT 
ACCCCCGGCG CGGCCGGCCG CATGCAGCCG CGCGGCGGCC GCGGCGCGGT CTCGGCGGGC 
AGCCAGACCA TCAACCGGAT GCCCTATCAG GTGGCCAGTC CGGATCTTGC TTCCAGCCCG 
ATCATGCGCG GCCAGCGCAG CGCGATCTCG CGGCGCGAGG CTTTGATTTT GTTAACCCTG 
CTCAATCATC CTTGGCTGCT GCACGACCGG CTGGAGGAGG TGGCGGCGCT GGAACTGGCG 
CATCCGGAGG CGCATCGGCT GCGCGCCGGG ATCATTGCCG CCTTCGCCAA CGACTATCAT 
CATACCGGAT CTCCCGGCGA GCCCAGCGCG AAACTCCGCG CGGATCTCGC AGCCGCAGGA 
TTGTCCGAGC AACTTCAACG CGTTGAGCGC GCGATCACGA CCAACGACGT GTGGGCGGCC 
GGCCCCGACG CGGCGCCGGA AGACGTTCTT TCGACGTGGC ATCAATTGGT TGCCTTGCAT 
CGGCAGTGGC ACTCATTACT TAGGGAATTG AAGGATGCCG AGTTGGCCTT GGGTGACCAG 
CAGAGCGAAG CGAATTTTGG CTGGCTGCGT GACGTCAAGG CGCGGCTGGC GGAAGTGGAT 
GGCACCGAGG CGCTGATCGA GGGCTTCGGC GAGTCGTCCG GCCGGTTCCA GCGCAGCGTG 
TGA 

 

Protein sequence

MRFTPQFLDE LRARLPVSEV VGRRVKLKKA GREWKGLSPF QQEKSPSFTV NDQKGFYHDF 
SSGKHGDIIS FVMETDGCGF TEAVERLAQM AGVPLPAVTP DAARQEQRRK SLYDVMDLAA 
KFFADTLAAR QGARARGYLA DRAMSPATQL KFRIGYAPGE RFALKEHLGK LGIPVEDMVE 
AGLLISGEDI PVPFDRFRDR VMFPIADVRG RVIAFGGRAL EKDVPAKYLN SPETPLFHKG 
DNLYNLAVAR AAAHDGAPLI VVEGYVDVIA MVGAGYAATV APLGTALTEN QLQLLWKMAD 
EPILCFDGDK AGQKAAWRAA DMALPHLAPG KSLRFALLPE GQDPDDLARS GGRAAIDEVI 
GSARGLADVL WTREIQSGSF ATPERRAALE ARINELTNGI RDEVLRRYYR QDMAERLRSA 
FAPQGGFGGR GGYGRGGPRG GGGGGFGGES GRGFPQRSAF TPGAAGRMQP RGGRGAVSAG 
SQTINRMPYQ VASPDLASSP IMRGQRSAIS RREALILLTL LNHPWLLHDR LEEVAALELA 
HPEAHRLRAG IIAAFANDYH HTGSPGEPSA KLRADLAAAG LSEQLQRVER AITTNDVWAA 
GPDAAPEDVL STWHQLVALH RQWHSLLREL KDAELALGDQ QSEANFGWLR DVKARLAEVD 
GTEALIEGFG ESSGRFQRSV