Gene RPC_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0905 
Symbol 
ID3969785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1001500 
End bp1002603 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID637924021 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_530794 
Protein GI90422424 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA CGACAAAGGC CAAGGCGACG ACCAAGGCCA AGACCACAAC CAAGACCACA 
ACCAAGACCA AGCCCACCGC CAAGGCGGCA TCCAAGGCCA AGACCGCGAG CAAGACCGCG
AGCAAGGCGG CCGGCAAGCC CAAACCGACA TCCAAAGCCA AGCCGGCGGC GACCCCCCCG
GCCACGCCGC AGTCGCCATT TGCCAAGATC GCGCCGGGTG AATTGCAGAC CCTGTTCGAT
TACGTCCGCT ATGCGGTCAG CCGTTTTGCC GAAGCCAATC TGGCGTTCGC GCACGGCACC
ACCGATCCGG TGTCGGAAGC AGCGTTCCTG GTCTGCGACA CGCTGTATCT GCACCCCGAG
CGTTTCGAGG AGTTTGCCGC CGCGCGGGTC ACCGCAGCCG AGGGCGAGCA GATCCTCGAG
GTGATCCATC GCCGGGTGAC GACGCGGCTG CCCGCAGCCT ATCTGGTCAA CAAGGCCTAC
ATGCTCGGCC TGCCGTTCTA TGTCGACGAG CGGGTGATCG TGCCGCGCTC GTTCATCGGC
GAACTGCTCG GCTCGCATTT CGACGGCGAG GACGGTTCGC TGATCGGCGA TCCCGAGGCG
GTGGAAAGCG TGCTCGATCT GTGCACCGGC TCCGGCTGCC TCGCGGTGCT GGCGAGCCAG
CGCTTTCCCA ATGCCCGGAT CGACGCCGTC GACGCCTCGC CGGACGCGCT GGAAGTCGCC
GCGGAGAATA TCGACATCTA CGAGCTCGAG GATCGCGTGA CGCTGTATCA AGGCGATCTG
TTCAAGCCGC TCGGCGACAC CCGCTACGAC CTGATCATCT CCAACCCGCC TTATGTCGAT
GCGCAGGGCA TGGCCGATCT GCCGGAGGAA TGCCGCGCCG AGCCGGAGCT GGCGTTCTTT
GGCGGCGAGG ACGGGCTCGA CATCGTGCGG CGGATTCTCG CCGAGGCGAA GCAGCACCTC
ACCCCGACGG GCGGGCTATT GTGCGAGATC GGCCGCGGCC GCGACAACAT CGACGCGGCG
TTCCCCGATT TGCCGCTATT GTGGCTCGAC ACCGAGGAGT CCGAGGCCGA GGTGTTCTGG
ATCGCGGCTG CGGATCTGAC TTAA
 
Protein sequence
MAKTTKAKAT TKAKTTTKTT TKTKPTAKAA SKAKTASKTA SKAAGKPKPT SKAKPAATPP 
ATPQSPFAKI APGELQTLFD YVRYAVSRFA EANLAFAHGT TDPVSEAAFL VCDTLYLHPE
RFEEFAAARV TAAEGEQILE VIHRRVTTRL PAAYLVNKAY MLGLPFYVDE RVIVPRSFIG
ELLGSHFDGE DGSLIGDPEA VESVLDLCTG SGCLAVLASQ RFPNARIDAV DASPDALEVA
AENIDIYELE DRVTLYQGDL FKPLGDTRYD LIISNPPYVD AQGMADLPEE CRAEPELAFF
GGEDGLDIVR RILAEAKQHL TPTGGLLCEI GRGRDNIDAA FPDLPLLWLD TEESEAEVFW
IAAADLT