Gene RPC_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0643 
Symbol 
ID3970621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp696325 
End bp698388 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content66% 
IMG OID637923760 
Productphosphate acetyltransferase 
Protein accessionYP_530535 
Protein GI90422165 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0280] Phosphotransacetylase
[COG0857] BioD-like N-terminal domain of phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA TTAAACATCC GCGTGGGCTG TTTGTCGCCC CAGCCTCGTC GGACTTCGAG 
GTTTCCGCCA TCTCGCTCGG GCTCGTTGAC TCGCTTAGAG CCCGCGGCCT CGCAGTGGGC
TACGTCAAGC CGATCGGCGA TCCCGGCGCG ATGCTAAACG ACCGCTCCTC GGCCTTCGCC
CGTCGTATGT TCGGCCTCAA GACGCCCGAG GCCATTCCGG CGGAGCGTGC AGAACAAATG
ATCATCGCCG GACGCTCGGC GACGCTGCTC GAAGAGGTGG TGGCGCTCGT CAGCGAGTTG
GGCGACGATC TCGACATCGT TGTCGTCGAG GGCGCTGCGC TTGCCGACGG CCACGGTCTG
CTCGCCGAGT TCGGCTTCGC GGTGGCGCGC AACCTTTCGG CCGACGTCAT CCCTGTGATC
AGCGGGCGCG ACAGCGGGGC GGCACGAATC GGCGGTGCAC TGATCGACGC CGTCCATCGC
GCCGGCGGGG CGGAGAGCTG CGCGGGCGCG ATCGTGATTC GTTGCCCGGA CGGGGAGCTC
GCGCCGCTGC GCGATCTGTC TTTGCCCGTG CGGTTGCTCG GAGTGCTACC CGAGGACCCC
GGCCTCGCCG CGCCGCGTCT TTCCGATGTC GTCGCCGATC TCGGCTTCGA GGTGCTGCAT
TCCGGGCAGC TCGCCGACGC GCGCATGCGC GACGTGATCG TTGCGGCCCG CGGGCCCGAG
CATATCGTCG ACCTGCTGCG CCCTGGAACG CTCGTCGTCA CCCCTGGCGA TCGCCACGAT
GTCGTCATCA CGACGGCGCT CGCCTCCACC AGCGGCATGC CGATAGCGGG ATTGCTGCTC
ACCTGCGCTG CCGCTCCCAC CGATTCGCTC AATGCTTTCC TGATGCCGCG CTTCGGCGGG
TTGACGGTGC TCAAGACCGA ACTGCAAACG TTCGAGGCGG CGATGAAGCT CGGCGAGTTC
GACCGCGGCG TGCGCAGCGA CGATGCCCGG CGCATGGAAC GGCTGATCGC TCACGCCAGC
GAGAACCTCG ACCTCAGTCT GATGTCGACG GCATCGAAGC GCAGCAGCGG CGAAGCCATG
CCGCCGCCGG TGTTCCGTCA CAAACTGATC CGCGCCGCCC GCGCCGCCGC CCGCCGCATC
GTGTTGCCCG AAGGCGATGA GCCGCGCACG CTGGCCGCCG CCGCCGATTG CACGCGTCGC
GGCATCGCGC ACTGCGTGTT GCTGGGCGAG TGTTCCGAGG TGCGCAACGT CGCGGCCCGT
TATGGTGTCG ACCTGCCCGG CGACATCGAA ATCCTCGATC CGGCCAGCCT GCGCGCCAGC
TATGTCGAGC CGATGGTGCG ATTGCGCAAG TCCAAGGGAC TGACGCCCGA GGAAGCGCTG
TCGCAGCTTG AGGACAATGT CGTCCTCGCC ACGATGATGC TGGCCGAGGG GCATGTCGAT
GGGCTCGTAT CCGGCGCCGT ACACACCACT GCCTCGACGG TGCGCCCGGC GCTGCAACTG
ATCAAAACCG CGGCCGGCAG CTCCTTGGTG TCGAGCGTGT TCTTCATGCT GATGCCGGAT
CAGGTGTTGG TCTACGGTGA CTGCGCGGTA AATCCCGACC CGACTGCCGA GCAGCTTGCC
GAGATCGCGG TGCAATCGGC CGACTCCGCC GCCGCCTTCG GCATTGAGCC AAGGGTGGCT
ATGATTTCCT ACTCGACCGG TGAATCGGGG ACGGGCGGCG ACGTCGACAA GGTCCGGGCG
GCGACGGAGA TTGTTAGAAA GCTGCGGCCT GAACTCGCGG TCGATGGGCC GATCCAATAC
GACGCGGCGA CAGTTGAAAG CGTCGGGCGG CAGAAGGCAC CGGGCAGTCC GGTCGCCGGT
AGAGCCAATG TGTTCGTTTT CCCCGACCTC AACACCGGCA ACACCACCTA CAAGGCGGTG
CAGCGTTCGG CCGACGTCAT ATCGATCGGA CCGATGCTGC AGGGACTTCG AAAGCCGGTC
AACGACCTGT CGCGCGGCGC GCTGGTCGAC GACATCATCT ACACCATCGC CATCACCGCC
ATGCAGGCGG CCCAAGCGAA ATAA
 
Protein sequence
MTKIKHPRGL FVAPASSDFE VSAISLGLVD SLRARGLAVG YVKPIGDPGA MLNDRSSAFA 
RRMFGLKTPE AIPAERAEQM IIAGRSATLL EEVVALVSEL GDDLDIVVVE GAALADGHGL
LAEFGFAVAR NLSADVIPVI SGRDSGAARI GGALIDAVHR AGGAESCAGA IVIRCPDGEL
APLRDLSLPV RLLGVLPEDP GLAAPRLSDV VADLGFEVLH SGQLADARMR DVIVAARGPE
HIVDLLRPGT LVVTPGDRHD VVITTALAST SGMPIAGLLL TCAAAPTDSL NAFLMPRFGG
LTVLKTELQT FEAAMKLGEF DRGVRSDDAR RMERLIAHAS ENLDLSLMST ASKRSSGEAM
PPPVFRHKLI RAARAAARRI VLPEGDEPRT LAAAADCTRR GIAHCVLLGE CSEVRNVAAR
YGVDLPGDIE ILDPASLRAS YVEPMVRLRK SKGLTPEEAL SQLEDNVVLA TMMLAEGHVD
GLVSGAVHTT ASTVRPALQL IKTAAGSSLV SSVFFMLMPD QVLVYGDCAV NPDPTAEQLA
EIAVQSADSA AAFGIEPRVA MISYSTGESG TGGDVDKVRA ATEIVRKLRP ELAVDGPIQY
DAATVESVGR QKAPGSPVAG RANVFVFPDL NTGNTTYKAV QRSADVISIG PMLQGLRKPV
NDLSRGALVD DIIYTIAITA MQAAQAK