Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0643 |
Symbol | |
ID | 3970621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 696325 |
End bp | 698388 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923760 |
Product | phosphate acetyltransferase |
Protein accession | YP_530535 |
Protein GI | 90422165 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0280] Phosphotransacetylase [COG0857] BioD-like N-terminal domain of phosphotransacetylase |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAAA TTAAACATCC GCGTGGGCTG TTTGTCGCCC CAGCCTCGTC GGACTTCGAG GTTTCCGCCA TCTCGCTCGG GCTCGTTGAC TCGCTTAGAG CCCGCGGCCT CGCAGTGGGC TACGTCAAGC CGATCGGCGA TCCCGGCGCG ATGCTAAACG ACCGCTCCTC GGCCTTCGCC CGTCGTATGT TCGGCCTCAA GACGCCCGAG GCCATTCCGG CGGAGCGTGC AGAACAAATG ATCATCGCCG GACGCTCGGC GACGCTGCTC GAAGAGGTGG TGGCGCTCGT CAGCGAGTTG GGCGACGATC TCGACATCGT TGTCGTCGAG GGCGCTGCGC TTGCCGACGG CCACGGTCTG CTCGCCGAGT TCGGCTTCGC GGTGGCGCGC AACCTTTCGG CCGACGTCAT CCCTGTGATC AGCGGGCGCG ACAGCGGGGC GGCACGAATC GGCGGTGCAC TGATCGACGC CGTCCATCGC GCCGGCGGGG CGGAGAGCTG CGCGGGCGCG ATCGTGATTC GTTGCCCGGA CGGGGAGCTC GCGCCGCTGC GCGATCTGTC TTTGCCCGTG CGGTTGCTCG GAGTGCTACC CGAGGACCCC GGCCTCGCCG CGCCGCGTCT TTCCGATGTC GTCGCCGATC TCGGCTTCGA GGTGCTGCAT TCCGGGCAGC TCGCCGACGC GCGCATGCGC GACGTGATCG TTGCGGCCCG CGGGCCCGAG CATATCGTCG ACCTGCTGCG CCCTGGAACG CTCGTCGTCA CCCCTGGCGA TCGCCACGAT GTCGTCATCA CGACGGCGCT CGCCTCCACC AGCGGCATGC CGATAGCGGG ATTGCTGCTC ACCTGCGCTG CCGCTCCCAC CGATTCGCTC AATGCTTTCC TGATGCCGCG CTTCGGCGGG TTGACGGTGC TCAAGACCGA ACTGCAAACG TTCGAGGCGG CGATGAAGCT CGGCGAGTTC GACCGCGGCG TGCGCAGCGA CGATGCCCGG CGCATGGAAC GGCTGATCGC TCACGCCAGC GAGAACCTCG ACCTCAGTCT GATGTCGACG GCATCGAAGC GCAGCAGCGG CGAAGCCATG CCGCCGCCGG TGTTCCGTCA CAAACTGATC CGCGCCGCCC GCGCCGCCGC CCGCCGCATC GTGTTGCCCG AAGGCGATGA GCCGCGCACG CTGGCCGCCG CCGCCGATTG CACGCGTCGC GGCATCGCGC ACTGCGTGTT GCTGGGCGAG TGTTCCGAGG TGCGCAACGT CGCGGCCCGT TATGGTGTCG ACCTGCCCGG CGACATCGAA ATCCTCGATC CGGCCAGCCT GCGCGCCAGC TATGTCGAGC CGATGGTGCG ATTGCGCAAG TCCAAGGGAC TGACGCCCGA GGAAGCGCTG TCGCAGCTTG AGGACAATGT CGTCCTCGCC ACGATGATGC TGGCCGAGGG GCATGTCGAT GGGCTCGTAT CCGGCGCCGT ACACACCACT GCCTCGACGG TGCGCCCGGC GCTGCAACTG ATCAAAACCG CGGCCGGCAG CTCCTTGGTG TCGAGCGTGT TCTTCATGCT GATGCCGGAT CAGGTGTTGG TCTACGGTGA CTGCGCGGTA AATCCCGACC CGACTGCCGA GCAGCTTGCC GAGATCGCGG TGCAATCGGC CGACTCCGCC GCCGCCTTCG GCATTGAGCC AAGGGTGGCT ATGATTTCCT ACTCGACCGG TGAATCGGGG ACGGGCGGCG ACGTCGACAA GGTCCGGGCG GCGACGGAGA TTGTTAGAAA GCTGCGGCCT GAACTCGCGG TCGATGGGCC GATCCAATAC GACGCGGCGA CAGTTGAAAG CGTCGGGCGG CAGAAGGCAC CGGGCAGTCC GGTCGCCGGT AGAGCCAATG TGTTCGTTTT CCCCGACCTC AACACCGGCA ACACCACCTA CAAGGCGGTG CAGCGTTCGG CCGACGTCAT ATCGATCGGA CCGATGCTGC AGGGACTTCG AAAGCCGGTC AACGACCTGT CGCGCGGCGC GCTGGTCGAC GACATCATCT ACACCATCGC CATCACCGCC ATGCAGGCGG CCCAAGCGAA ATAA
|
Protein sequence | MTKIKHPRGL FVAPASSDFE VSAISLGLVD SLRARGLAVG YVKPIGDPGA MLNDRSSAFA RRMFGLKTPE AIPAERAEQM IIAGRSATLL EEVVALVSEL GDDLDIVVVE GAALADGHGL LAEFGFAVAR NLSADVIPVI SGRDSGAARI GGALIDAVHR AGGAESCAGA IVIRCPDGEL APLRDLSLPV RLLGVLPEDP GLAAPRLSDV VADLGFEVLH SGQLADARMR DVIVAARGPE HIVDLLRPGT LVVTPGDRHD VVITTALAST SGMPIAGLLL TCAAAPTDSL NAFLMPRFGG LTVLKTELQT FEAAMKLGEF DRGVRSDDAR RMERLIAHAS ENLDLSLMST ASKRSSGEAM PPPVFRHKLI RAARAAARRI VLPEGDEPRT LAAAADCTRR GIAHCVLLGE CSEVRNVAAR YGVDLPGDIE ILDPASLRAS YVEPMVRLRK SKGLTPEEAL SQLEDNVVLA TMMLAEGHVD GLVSGAVHTT ASTVRPALQL IKTAAGSSLV SSVFFMLMPD QVLVYGDCAV NPDPTAEQLA EIAVQSADSA AAFGIEPRVA MISYSTGESG TGGDVDKVRA ATEIVRKLRP ELAVDGPIQY DAATVESVGR QKAPGSPVAG RANVFVFPDL NTGNTTYKAV QRSADVISIG PMLQGLRKPV NDLSRGALVD DIIYTIAITA MQAAQAK
|
| |