| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0638 |
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| Symbol | |
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| ID | 3970673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 690171 |
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| End bp | 690812 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923755 |
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| Product | 3-oxoacid CoA-transferase |
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| Protein accession | YP_530530 |
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| Protein GI | 90422160 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC GCCACCGCAT GGCCAAGAGA GCCGCCGCGT ATTTCGCCGC CGGCGATATC
GTCAATCTCG GCATCGGCGT GCCGAGCATG TGCAACAACT ACGCCGTTCC TGGCGTGATG
TTTCACACAG AAAACGGCCT CATCGGCGTC GGCCCGCTCG CCGAGGGGCT GCAAAGAGTG
GAGAGTTTCT CCAACGCAAA CGCCATGCGC TTCGTGCCCG TGGTCGGCGC GAGCGCCTTC
GACAGCGCCG AGAGCTTCGC GATCGTCCGC TCGGGACGCC TCGCCGCCAC CGTCTTGGGC
GGCCTGCAAG TGTCGCGGGA GGGCGATCTC GCCAACTGGG CGCGGCCAGG CAAGATGTTA
GGAATGGGCG GGGCCATGGA CCTCGTCAAT GGCGCGCGGA AGGTGATTGT CACGATGGAA
CTGACCGCCA AGGGCGCGCC GAAGATCCTG AACAAGTGCA CCTATCCGCT CACCGGCGTC
GCCTGCGTCG ATCACATCGT CACCGAGCAA TGCGTGATCG ATGTGACGCC GGAGGGTCTA
GTGTTGCGCG AGTTGCTGGA GGGGCTCGTC CCGGACGACA TCCGTCGTCA GATCGAGCCG
GAACTGATGG TCTTCGACAC GCTGATCACC ATGGTGGCGT AA
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| Protein sequence | MDIRHRMAKR AAAYFAAGDI VNLGIGVPSM CNNYAVPGVM FHTENGLIGV GPLAEGLQRV
ESFSNANAMR FVPVVGASAF DSAESFAIVR SGRLAATVLG GLQVSREGDL ANWARPGKML
GMGGAMDLVN GARKVIVTME LTAKGAPKIL NKCTYPLTGV ACVDHIVTEQ CVIDVTPEGL
VLRELLEGLV PDDIRRQIEP ELMVFDTLIT MVA
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