Gene RPC_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0616 
Symbol 
ID3970687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp668885 
End bp669949 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID637923732 
Productbile acid:sodium symporter 
Protein accessionYP_530508 
Protein GI90422138 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCT TCGAACGCTT TCTGACGCTG TGGGTGGCGC TGTGCATTGT CGTCGGCATC 
GCGCTCGGGC ATCTGTTGCC GGGCGTCTTC CAGACGATCG CCGCCGCCGA GATCGCCAAG
GTCAACCTGC CGGTGGCGGC GTTGATCTGG CTGATGATCG TGCCGATGCT GATCAAGATC
GATTTCGCGG CGCTGGGCCG GGTCAAGGAG CATTGGCGCG GCATCGGCGT CACGCTGTTC
ATCAACTGGG CGGTGAAGCC GTTCTCGATG GCAGCGCTGG GCTGGCTGTT CATCGGCTAT
CTGTTTCGCG ATCACCTGCC GGCCGATCAG ATCGACAGCT ACATCGCCGG CCTGATCATC
CTGGCTGCGG CGCCCTGCAC CGCGATGGTG TTCGTGTGGT CGAACCTGAC GAAGGGCGAG
CCGCATTTCA CGCTGAGCCA GGTCGCGCTC AACGACACCA TCATGGTGTT TGCGTTTGCG
CCGATCGTAG GGCTTCTGCT CGGGCTGTCG TCGATCATCG TGCCGTGGGG CACGCTGCTG
CTGTCGGTGG TGCTGTACAT CGTGGTGCCG GTGATATTCG CGCAGATCTT GCGTCGCCGC
CTGCTCGCAA GCGGCGGCGA GGCGGCCTTA GAGCGGCTGC TCGGCCGACT GCAACCGCTG
TCGCTGATCG CGCTGCTGGC GACGCTGGTG CTGCTGTTCG GCTTCCAGGG CGAGCAGATC
CTGGCGCAGC CGTTGATCAT CGGCCTGTTG GCGGTGCCGA TCCTGATCCA GGTCTATTTC
AACGCCGGGC TCGCCTATCT GCTGAACCGG ATTGCCGGCG AGCAGCATTG CGTCGCCGGT
CCCTCGGCGC TGATCGGCGC CTCGAATTTC TTCGAACTCG CGGTCGCGGC GGCAATCAGC
CTGTTCGGCT TCCAGTCTGG CGCAGCGCTC GCCACCGTGG TCGGCGTGCT GATCGAGGTT
CCGGTGATGC TCACCGTGGT GTGGATCGTC AATCGCTCGA AGGGCTGGTA CGAGCGCGAC
CAGCCGGCGG CTTTGACCGC CGCGGCGCCG AAGCAGCCGG TCTGA
 
Protein sequence
MSIFERFLTL WVALCIVVGI ALGHLLPGVF QTIAAAEIAK VNLPVAALIW LMIVPMLIKI 
DFAALGRVKE HWRGIGVTLF INWAVKPFSM AALGWLFIGY LFRDHLPADQ IDSYIAGLII
LAAAPCTAMV FVWSNLTKGE PHFTLSQVAL NDTIMVFAFA PIVGLLLGLS SIIVPWGTLL
LSVVLYIVVP VIFAQILRRR LLASGGEAAL ERLLGRLQPL SLIALLATLV LLFGFQGEQI
LAQPLIIGLL AVPILIQVYF NAGLAYLLNR IAGEQHCVAG PSALIGASNF FELAVAAAIS
LFGFQSGAAL ATVVGVLIEV PVMLTVVWIV NRSKGWYERD QPAALTAAAP KQPV