Gene RPC_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0564 
Symbol 
ID3970768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp616024 
End bp616689 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID637923681 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_530458 
Protein GI90422088 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTG AACTCATCGA AATGATCGCC TGGTCGACGC TCGACACCCT GATGATGGTC 
GGGCTGTCGG GACTGTTCGG CACCGTGCTC GGCCTGCCGC TCGGCATCTT TCTCGCCACC
AGCCGCGCCA ACGAACTGTT TCCGGCGCCG GTCGCCAACC GCATCGTCGG ATTGATCGTC
AACGCCACCC GCTCGACGCC GTTCATCATC CTGGTGGTGG CGATCGTGCC GCTGACGCGC
TTGATCGCCG GCACCTCGAT CGGCACCGCG GCGGCCACCG TGCCTTTGAC CATCGCGGCG
ATCCCGTTCA TCGCCCGCGT CATCGAGGCT GCGATCCGCG AAGTCGACCA GGGGCTGATC
GAGGCGGCGC GGGCGTTCGG CGCGAGCCCG CTGCAGATCG TCCGCAAGGT GCTGCTGCCG
GAAGCGATGC CGGCGGTTAC GCTGGCCTTG ACGCTGACCA TCGTCAGCCT GCTCGGCTAT
TCGGCGATGG TCGGCGCGGT CGGCGGCGGC GGCCTCGGCG ATCTTGGCAT TCGTTACGGC
TACCAGCGCT TCATGCCCGA GGTGATGCTC ACCGTGGTGC TGGTGCTGAT CGCGCTGGTG
CAGGGCGTGC AGACACTCGG CGACACGGTG GCGCGCCGGC TCGACAAGCG TTCGCGGCAA
TCCTGA
 
Protein sequence
MSPELIEMIA WSTLDTLMMV GLSGLFGTVL GLPLGIFLAT SRANELFPAP VANRIVGLIV 
NATRSTPFII LVVAIVPLTR LIAGTSIGTA AATVPLTIAA IPFIARVIEA AIREVDQGLI
EAARAFGASP LQIVRKVLLP EAMPAVTLAL TLTIVSLLGY SAMVGAVGGG GLGDLGIRYG
YQRFMPEVML TVVLVLIALV QGVQTLGDTV ARRLDKRSRQ S