Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0564 |
Symbol | |
ID | 3970768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 616024 |
End bp | 616689 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923681 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_530458 |
Protein GI | 90422088 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCTG AACTCATCGA AATGATCGCC TGGTCGACGC TCGACACCCT GATGATGGTC GGGCTGTCGG GACTGTTCGG CACCGTGCTC GGCCTGCCGC TCGGCATCTT TCTCGCCACC AGCCGCGCCA ACGAACTGTT TCCGGCGCCG GTCGCCAACC GCATCGTCGG ATTGATCGTC AACGCCACCC GCTCGACGCC GTTCATCATC CTGGTGGTGG CGATCGTGCC GCTGACGCGC TTGATCGCCG GCACCTCGAT CGGCACCGCG GCGGCCACCG TGCCTTTGAC CATCGCGGCG ATCCCGTTCA TCGCCCGCGT CATCGAGGCT GCGATCCGCG AAGTCGACCA GGGGCTGATC GAGGCGGCGC GGGCGTTCGG CGCGAGCCCG CTGCAGATCG TCCGCAAGGT GCTGCTGCCG GAAGCGATGC CGGCGGTTAC GCTGGCCTTG ACGCTGACCA TCGTCAGCCT GCTCGGCTAT TCGGCGATGG TCGGCGCGGT CGGCGGCGGC GGCCTCGGCG ATCTTGGCAT TCGTTACGGC TACCAGCGCT TCATGCCCGA GGTGATGCTC ACCGTGGTGC TGGTGCTGAT CGCGCTGGTG CAGGGCGTGC AGACACTCGG CGACACGGTG GCGCGCCGGC TCGACAAGCG TTCGCGGCAA TCCTGA
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Protein sequence | MSPELIEMIA WSTLDTLMMV GLSGLFGTVL GLPLGIFLAT SRANELFPAP VANRIVGLIV NATRSTPFII LVVAIVPLTR LIAGTSIGTA AATVPLTIAA IPFIARVIEA AIREVDQGLI EAARAFGASP LQIVRKVLLP EAMPAVTLAL TLTIVSLLGY SAMVGAVGGG GLGDLGIRYG YQRFMPEVML TVVLVLIALV QGVQTLGDTV ARRLDKRSRQ S
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