Gene RPC_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0563 
SymbolmetN 
ID3970767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp614964 
End bp616034 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID637923680 
ProductDL-methionine transporter ATP-binding subunit 
Protein accessionYP_530457 
Protein GI90422087 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTGC CAGCTTCGAC CGCGCCCTCC GGCATTTCGA TCGAAAATGT CGCCAAGACC 
TATCCGGCGC GCAAAGGCAG CGCCGAAGTC GTCGCGCTCG ACAACATCAA TCTGAATGTG
CCGGAAGGCA GCATCGTCGG CGTGATCGGC CGCAGCGGCG CCGGCAAATC GTCGCTGATC
CGGCTGATCA ACGGGCTCGA ACAGCCGACC AAGGGCCGGG TGATCGTCAA CGGCACCGAG
ATCACCTCGC TCGACGAGCC GGCGCTGCGC CAGGCGCGGC GCTCGATCGG GATGATCTTC
CAGCATTTCA ATCTTCTGTC GTCGCGCACC GCGTTCGACA ACATCGCGCT GCCGCTGGAG
ATCGCCGGCG TCGCCAAGCG CGAGATCGCC AAGACGGTGC TGCCGCTGCT CGACATGGTC
GGCCTCGCCG ACAAGCGCGA CCGCTACCCG GCGGAATTGT CCGGCGGCCA GAAGCAGCGC
GTCGGCATCG CGCGGGCGCT GGCGACGAGT CCCAAAGTGC TGTTGTCGGA TGAGGCGACT
TCGGCGCTCG ATCCGGAAAC CACCGACCAG ATCCTCGAGC TGCTGAAGCG GATTAACGCC
GACTTGCGGC TGACCATCCT GTTCATCACC CACGAGATGG CGGTGGTGAA AGCGCTCGCC
GATCGCGTCG CGGTTTTGGA GCGCGGCCAC ATCGTCGAGG AAGGCACCAC CTACAACGTG
TTCGCCTCGC CGCAGCACGA AGTGACCAAG CGCTTCGTCT CCTCTGTCAC CGGCAGCCAG
GCGCCGGACT GGTTGCTAGC GCGGCTGAAG GCCGAGCGCG GGCCGCAGGA CGAAGCCGTG
CTGCGCATCT CGTTCCGCGG CAGCGACGCC GGCCAGCCGC TGTTGTCGCA GATCGCCCGC
TCGTTCGGCA TCGACATCAA TATTCTCAAC GGCCAGGTCG AGATGATCGC CGGCCATCCG
TTCGGCACGC TGATCGTGTC GATCCCGGCC GAGCCGGAGC TGGTCGGCCA AGTGTCCAAC
CAATTGAAGG CCGCCGGCAG CGCGGTGGAG CATCTCGGTT ATGTCGCCTG A
 
Protein sequence
MELPASTAPS GISIENVAKT YPARKGSAEV VALDNINLNV PEGSIVGVIG RSGAGKSSLI 
RLINGLEQPT KGRVIVNGTE ITSLDEPALR QARRSIGMIF QHFNLLSSRT AFDNIALPLE
IAGVAKREIA KTVLPLLDMV GLADKRDRYP AELSGGQKQR VGIARALATS PKVLLSDEAT
SALDPETTDQ ILELLKRINA DLRLTILFIT HEMAVVKALA DRVAVLERGH IVEEGTTYNV
FASPQHEVTK RFVSSVTGSQ APDWLLARLK AERGPQDEAV LRISFRGSDA GQPLLSQIAR
SFGIDINILN GQVEMIAGHP FGTLIVSIPA EPELVGQVSN QLKAAGSAVE HLGYVA