Gene RPC_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0552 
Symbol 
ID3970755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp599598 
End bp600401 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID637923668 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_530446 
Protein GI90422076 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCT ATGCAGACAT CGGCGTCGAA AAGACCGGCC ACGTCACCAC CATCGAGATC 
CAGCGGCCGC CGCTGAACTA CTTCGACATC TCGTTGATCG ACCAAATCGC CGACGCGCTG
GGCGAGATCG ACAACGATCC CGAGGCCCGC GCCGTGGTGC TGGCGGCGCA AGGCAAGGCG
TTCTGCGCCG GCGCCAATTT CGGCGATCCG TCGCGCACCC CGATCGATGC CAGCGAGCAG
TCCGACCCGG CCTCCGGGCT CGGCAAGATC GGCCATCTCT ACATCGAGGC GGTACGGATT
TTTCGCAACA AGAAGCCGAT CGTGGCCGCG GTCCACGCCG CCGCGATCGG CGGCGGACTT
GGGCTAGCGC TGGCGGCGGA TTTTCGCGTC ACCTGTCCGG AAGCGCGGTT CTCCGCGAAT
TTCACCAAGC TCGGCTTTCA TCCGGGCTTC GGACTGACCG TGACCTTGCC GGAACTGATC
GGCCGCAACA ATGCCGAGCT GATGTTCTAT ACCAGCCGCC GCGTGACCGG CGAGGAGGCC
TACGCGATGG GGCTCGCCAA TGTGCTGGTG CCGCACGACG AGTTGCGCGG CGCGGCGCTG
AAGCTGGCGC GGGAAATCGC CGAGTGCTCG CCGCTGGGGC TGTTGTCGAC GCGGGCGACG
ATGCGCGCCG GCCTCGCCGA GCGGGTGTTG GCCGCGACCC ACCATGAACT CGCCGAGCAG
ACCCGGCTGC GCGCCACCGA GGATTTCCGC GAAGGTGTCC GCGCCAGCGA AGAGCGGAGG
CTCGCGCACT TCAAGGGACG CTGA
 
Protein sequence
MTSYADIGVE KTGHVTTIEI QRPPLNYFDI SLIDQIADAL GEIDNDPEAR AVVLAAQGKA 
FCAGANFGDP SRTPIDASEQ SDPASGLGKI GHLYIEAVRI FRNKKPIVAA VHAAAIGGGL
GLALAADFRV TCPEARFSAN FTKLGFHPGF GLTVTLPELI GRNNAELMFY TSRRVTGEEA
YAMGLANVLV PHDELRGAAL KLAREIAECS PLGLLSTRAT MRAGLAERVL AATHHELAEQ
TRLRATEDFR EGVRASEERR LAHFKGR