Gene RPC_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0544 
Symbol 
ID3970785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp589337 
End bp590338 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID637923660 
Producthypothetical protein 
Protein accessionYP_530438 
Protein GI90422068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.520266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT TCGCACCCGC TTGTCGCGGC GGCTGCGGGG GCGCCTTACG CCGGCTTGGG 
TCGGCGTGGA GTTTTGCATA TGGCGCACCA TCTCGTCACA CAGGATCTCC GTTTGTGACT
CGTTCCGCCG TGATTTCATC TTCCCTCTCC GCGATCCTGG CGTCCGTCGC GCGTGGCGCC
GCTCGATGCG CGCTGGTTTC GCTTGGCTTG ATGGCAATGG CGCGGGCCGT CCCGGCCCTC
GCCCAGGGCA GCCTTGATGC GCGCTACGAG GCGACGTTGG CCGGAATTCC GGTCGGCAAA
GGCGTCTGGC GGATCGATAT CGGCGACGAT CAATACTCCG CCTCGGCCGG CGGCGGTTCG
TCCGGGCTGC TGAAGGCGTT TGCGGGCGGC GACGGAACCG GTGCGTCGCA GGGCCGGGTG
CTCAATGGTC AGCTGCAGCC GACCAACTAT AACGCGACCA CCTCCACCTC GCGGAAGTCG
GAATCGATCC GGATGACGCT GGCCGGCGGC ACCATCAAGG AGTTTGCGAT CGTGCCGGAG
CCGCCGGTGG ATGCCGACCG CATCCCGGTG ACCGACGCGC ATCGCCGCGG CGTATTCGAC
CCGATGACGG GCTCGCTGTT ACGGGTGGCC GGCGGCGGCG ATCCGCTCGC CGCCGAGTCC
TGCCGCACGA CGACGTCGAT TTTCGACGGC CGGATGCGTT ACGACCTGCG GTTCGATTTC
AAGCGTATGG ACACCGTCAA GGCCGAAAAG GGCTATCGCG GGCCGGCGCT GGTCTGCGCG
ATCTATTTCT CGCCGATCTC CGGCTACATC GCCGATCGTG CGGCGATCAA ATATCTGGTC
GCCCAGCGCG ACATGGAGGT CTGGCTGGTA CCGATCGCCG GCACCCGCAT CCTGGTGCCG
TTCCGATTGA AGATTCCGAC CCCGCTCGGT AATGCGGTGC TGGAGGCCAC GCAATTCATC
ACTGCGGCAA CGCCGCCGCG AGCGGCCTCC AAGACCCAAT AG
 
Protein sequence
MKLFAPACRG GCGGALRRLG SAWSFAYGAP SRHTGSPFVT RSAVISSSLS AILASVARGA 
ARCALVSLGL MAMARAVPAL AQGSLDARYE ATLAGIPVGK GVWRIDIGDD QYSASAGGGS
SGLLKAFAGG DGTGASQGRV LNGQLQPTNY NATTSTSRKS ESIRMTLAGG TIKEFAIVPE
PPVDADRIPV TDAHRRGVFD PMTGSLLRVA GGGDPLAAES CRTTTSIFDG RMRYDLRFDF
KRMDTVKAEK GYRGPALVCA IYFSPISGYI ADRAAIKYLV AQRDMEVWLV PIAGTRILVP
FRLKIPTPLG NAVLEATQFI TAATPPRAAS KTQ