Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0425 |
Symbol | |
ID | 3970820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 456597 |
End bp | 457634 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923540 |
Product | polysaccharide deacetylase |
Protein accession | YP_530319 |
Protein GI | 90421949 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.404539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAGAG TAACGGTTCT GGCTGCGGCC GGCGGCGGTG TTTTGGCGAT CGTGATCGGT GCCACGGCAA GCCACATGTT CTTCAACAAA GCGTCCGATG CGGCCGAGGT CCAGGCCGAA TTGACCACCG GCACGGTGGC GGCGCGATGG CCGACGCCGC GCGCCGACGC CACCGAATCC ACCGCAGCGG CGCCGAGCGT CGCGACGCCG CAGACCCGCG CCGCCGAGGC CGCGAAGACC AGTGCGAGCT GCAGCCATCC CGGCGCGCTC GGCGTCTCGC GCACGGTGCA GATCGATGCC GCGGGCGGTC CCGGCTTCGG CCTCACGCAA TATCGCGACT ACGACTTCCT GCAGCCCGGC GAAGTGGTGC TGTCGTTCGA TGACGGACCC TGGCCGGTGA ACACCCGCGC GGTGCTGGCG GCGCTGGAGG CCGAATGCGT CAAGGCGGTG TTCTTCCCGA TCGGCAAACA CGCCTCTTGG CATCCGGCGA TCCTCAAGGA CGTGGTGGCG CAGGGCCACA CCATCGGCTC GCACACCTGG TCGCACGTCA ACCTCGCCAA GAAATCGCTG CAGGAAGCCA AGGACGAAAT CGAGAAGGGC TTCAGCGCCA TCGCGATTGC GGCCGGCCGG GCGCCGGCGC CGTTCTTCCG CTTTCCGCAG CTGCGTCAGA CCCCGGAATT GAAGGCCTAT CTCGGCGAAC GCAACATCGC GGCGTTCTCG ATCGACGTCG ACTCCAAGGA TTTCGCGATC CATGAGCCCG ACGCCGTGGT GAGCTCGATC ATGACCAAGC TGCAAAAGGC CGGCAAGGGC ATCATCCTGA TGCACGACTT CCAGCACAGC ACCGCGCTGG CGATGCCGCA GGTGCTGCAG CAGCTGAAGG CCGGCGGCTA CAAGGTGGTG CACGTCACCG CCAAGGACGC CGTGGTCACG CTGCCGCAAT ATGATTCCGC GGTCGCCGCA TTGATGCCGC CGGCACCCGC GGTCAGCGCG CGCGCCACCG CCGGCGTGGT GCGCACCGTC TCGGGTGCAG CGAATTAG
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Protein sequence | MRRVTVLAAA GGGVLAIVIG ATASHMFFNK ASDAAEVQAE LTTGTVAARW PTPRADATES TAAAPSVATP QTRAAEAAKT SASCSHPGAL GVSRTVQIDA AGGPGFGLTQ YRDYDFLQPG EVVLSFDDGP WPVNTRAVLA ALEAECVKAV FFPIGKHASW HPAILKDVVA QGHTIGSHTW SHVNLAKKSL QEAKDEIEKG FSAIAIAAGR APAPFFRFPQ LRQTPELKAY LGERNIAAFS IDVDSKDFAI HEPDAVVSSI MTKLQKAGKG IILMHDFQHS TALAMPQVLQ QLKAGGYKVV HVTAKDAVVT LPQYDSAVAA LMPPAPAVSA RATAGVVRTV SGAAN
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