| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0413 |
|---|
| Symbol | |
|---|
| ID | 3970865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 444530 |
|---|
| End bp | 444991 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637923528 |
|---|
| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_530307 |
|---|
| Protein GI | 90421937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTA CCGATCTGGT CGCGCCCGAG GCCGTTCTCC CGGCGTTGAA AGTCAATAGC
AAGAAGCAGG CGTTGCAGGA GTTGGCTGCA CGTGCCGCTG TGCTGACCGG ACAGAACGAA
CGCTCGATCT TCGAAGTGCT GCTGCAACGT GAGAAGCTCG GCACCACCGC GGTCGGCTAC
GGCGTGGCGA TTCCGCACGG CAAGCTGCCG AAGCTGGACA AGCTGTTCGG GCTGTTCGCG
CGGCTGGAGC GGCCGATCGA TTTCGAAGCG ATGGACGGAC AGCCGGTCGA TCTGGTGTTT
CTACTGCTGG CGCCGGAAGG CGCCGGCGCC GACCACCTCA AGGCGCTGGC CCGCATCGCG
CGGCTGTTGC GGGATATGGA CGTCGCCAAG AAGCTGCGCG CCTCGCGCGA CGCCCAGGCG
ATCTATTCGG TGCTGGCGCT GCCACCGGCA ACCGCAGCCT GA
|
|---|
| Protein sequence | MTITDLVAPE AVLPALKVNS KKQALQELAA RAAVLTGQNE RSIFEVLLQR EKLGTTAVGY
GVAIPHGKLP KLDKLFGLFA RLERPIDFEA MDGQPVDLVF LLLAPEGAGA DHLKALARIA
RLLRDMDVAK KLRASRDAQA IYSVLALPPA TAA
|
|---|
| |