| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0354 |
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| Symbol | |
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| ID | 3970958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 373978 |
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| End bp | 374979 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923468 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_530248 |
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| Protein GI | 90421878 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTA AGAAAAAGCC TCTGGTTGTC GTCACCCGCA AGCTGCCGGA CTCGATCGAG
ACCCGGATGC GCGAGCTGTT CGACGCGCGC CTCAATCTCG ACGACGAGCC GATGAGCCCG
GAGGCGCTGG CCGAGGCGGT GCGCACCGCC GATATTCTGG TCCCCACCGT CACCGACGAG
ATCACCGAAG AGATTTTGCA GCAGCCAGAC TCCCGGCTGA AGCTGATCGC CAATTTCGGC
AACGGCATCG ACAACATCAA CGTCGCCGCC GCGCATGCCC GCGGCATCAC CGTGACCAAC
ACGCCGAAGG TTTTGACCGA AGACACCGCC GACATGACCA TGGCGCTGAT TCTCGCGGTG
CCGCGGCGGC TGATCGAGGG CGCCTCGCTG TTGACCGAAG GCCGGGATTG GCCGGGCTGG
TCGCCGACCT GGATGCTGGG GCGGCGGCTC GGCGGCAAGC GGCTCGGCAT CATCGGCATG
GGCCGGATCG GCCAGGCGGT GGCGCGGCGC GCCCGCACTT TCGGGCTGCA GATCCATTAT
CACAACCGCC GCCCGGTGGC GCCGAAGATC GCCGACGAGT TGAGCGCGAC CTATTGGGAG
AGCCTCGACC AGATGCTGGC GCGGATGGAC ATCATCTCGG TGAACTGTCC GCACACGCCG
GCGACCTTCC ATCTGTTGTC GGCGCGCAGG CTGAAGCTGA TCCGCAAGGA CGCCTATGTG
GTCAACACCG CCCGCGGCGA GGTGATCGAC GAGGAGACGC TGACCCGGCT GATCGAGTCA
GGCGACATCG CCGGCGCCGG CCTCGACGTG TTCGAGAACG AGCCCGCGGT CAATCCGAAG
CTGGTGCGGC TCGCCAAGCA CGGCAAGGTG GTCTTGATGC CGCATATGGG CTCCGCCACT
ATCGAGGGCC GGGTCGAGAT GGGCGAGAAG GTGATCATCA ACATCCGCAC CTTCCTCGAC
AACCACAAGC CGCCGGACCG CGTGCTGCCG CACATGTTGT AA
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| Protein sequence | MSVKKKPLVV VTRKLPDSIE TRMRELFDAR LNLDDEPMSP EALAEAVRTA DILVPTVTDE
ITEEILQQPD SRLKLIANFG NGIDNINVAA AHARGITVTN TPKVLTEDTA DMTMALILAV
PRRLIEGASL LTEGRDWPGW SPTWMLGRRL GGKRLGIIGM GRIGQAVARR ARTFGLQIHY
HNRRPVAPKI ADELSATYWE SLDQMLARMD IISVNCPHTP ATFHLLSARR LKLIRKDAYV
VNTARGEVID EETLTRLIES GDIAGAGLDV FENEPAVNPK LVRLAKHGKV VLMPHMGSAT
IEGRVEMGEK VIINIRTFLD NHKPPDRVLP HML
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