| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0322 |
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| Symbol | |
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| ID | 3971003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 342914 |
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| End bp | 344116 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637923436 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_530216 |
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| Protein GI | 90421846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.809903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGAC CGCGCGATCC AACTAGGCCG GGACACACCC GACGCAACGC GGTGGGGCTG
ATCCTCGGCG CGCCGCTTTT GTCCGCCTGC GCCGGCGTGC AGCAATCGCT GACCGGGCCG
TTTTCCTCGA CGACCCCGCA GCCGGGTTCC GCTGGCCCGG CGCAACAGCC GGCCGCGGTC
GGCACCGGCC AGGTCAAGGT CGGGCTGATC CTGCCATTGT CGGCGCCCGG CAATGCCGGC
GTCGCGGCGC AATCGATGAA GAACGCCGCC GAATTGGCGC TGGCGGAATT CCAGAATCCC
AACATCCAGC TCCTGATCAA GGACGACGCC GGCAATCCGC AGGGCGCCCA GGCCGGCACC
CAGCAGGCGC TCGACGAGGG CGCGGAAATC ATCTTGGGGC CGTTGTTCGC GCTGGCGGTG
CCGGCCACCG CGCAGCTGGC GCGGGCCCGC GGGGTCTCGG TGATCGCGTT CTCCACCGAT
TCCAGCGTCG CCGGCCGCGG CGTCTATCTG TTGAGCTTTC TGCCGGAATC CGACGTCGTG
CGGATCGTCG ATTACGCCGC CTCCACCGGC AAAAGGTCGT TCGCAGCCCT GCTGCCGGAA
AACGCCTACG GCAATGTGGT CGAGGCCGCC TTCAAGCAGG CGGTCGGCCG CAAGGGCGGC
CGCATCGTGG CGTTCGAACG CTACGGCACC GATCGCGCCA CCCCGGCGCG CACCGTCGCC
GCGGCGCTCG GCGGCGCCGA CGCGTTGTTC TTGGCCGACG ACGGCGAGGC GCTGGTCGGC
GTGGCCGACG CGTTGACCGC TGCGGGGGCT GATCTCAAGC GCGTGCAACT GCTCGGCACC
GGGCTGTGGG ACAACCCGCG GGTGTTCGGC AACGCCGCGC TGCAGGGCGG GCTCTATGCC
GCGCCGGATC CGTCGGGCTT CCGCGCCTTC TCCGCGCGCT ACCGCACCAG ATACGGCGCC
GATCCGGTGC GCACAGCGAC GCTGGCCTAC GACGCGGTGG CGCTGGTGGC GGCCTTGGCG
CGCACCCAGG GCGCGCAGCG GTTCTCGCCC GAGGTGCTGA CCAATCCGTC GGGCTTTGCC
GGCATCGACG GGCTGTTTCG TTTCCGCGCC GACGGCAGCA ACGAGCGCGG CCTCGCGGTG
ATGCGAGTCG GCTCCGGCGG CAGCCAGCCG GCGGCCGGTT CGCCGAAGAG TTTTGGCGCC
TGA
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| Protein sequence | MAGPRDPTRP GHTRRNAVGL ILGAPLLSAC AGVQQSLTGP FSSTTPQPGS AGPAQQPAAV
GTGQVKVGLI LPLSAPGNAG VAAQSMKNAA ELALAEFQNP NIQLLIKDDA GNPQGAQAGT
QQALDEGAEI ILGPLFALAV PATAQLARAR GVSVIAFSTD SSVAGRGVYL LSFLPESDVV
RIVDYAASTG KRSFAALLPE NAYGNVVEAA FKQAVGRKGG RIVAFERYGT DRATPARTVA
AALGGADALF LADDGEALVG VADALTAAGA DLKRVQLLGT GLWDNPRVFG NAALQGGLYA
APDPSGFRAF SARYRTRYGA DPVRTATLAY DAVALVAALA RTQGAQRFSP EVLTNPSGFA
GIDGLFRFRA DGSNERGLAV MRVGSGGSQP AAGSPKSFGA
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