Gene RPC_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0299 
Symbol 
ID3971058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp321481 
End bp322182 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID637923413 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_530193 
Protein GI90421823 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTT ACACCATCAT CTTCTTGGCC CTCGCGGTGT TTATCTTCCT GCGTCTCCGC 
AATGTGCTGG GCCAGAAAAC CGGCAATGAG CGGCCGCCGT TTGATCGCGC CGCCCGCGAC
GTGGTGCGTG GCGCGCAGGA CAACGTCGTG CCGCTGCCAG GCGCCGTGGT TGACCAAGCT
CCGCAGACGC CGTCCGCGGA CGTGGTGCCG CCCACCGATC GTTGGAAAGG CGTGGCCGAA
CCGGGCACCC CGCTGGCGCA GGGGCTCAAC GCCATCGTGG CGCAGGATTC GTCGTTCGAT
CCGCAGCACT TCCTCACCGG CGCCCGCGGC GCCTATGAGA TGATCGTGCT GGCCTTCGCC
AATGGCGACC GCCGCGCGCT GAAGGATCTG TTGTCCCCGG AGGTTTATGA CAGCTTCGAG
GCGGTGATCC GCGAGCGCGA AAAGCAAGAG CAGAAGACCG AAACCCGGTT CGTCTCGATC
GACAAGGCCG AACTGGTGTC GGCCGAGGCG CGCGACCGCG CGGCGCAATT GACCGTGCGA
TTCGTCTCGC AGATGATCAC CGTGACCCGC GACAAGACGG GCGCGATTGT CGATGGAAAC
CCGGACAAGG TCGCCGATAT CACCGATGTT TGGACATTTG CCCGAGACGT CGGATCGCGC
GATCCGAACT GGAAGCTGGT CGGCACCGGC AGCGTCCATT AA
 
Protein sequence
MDIYTIIFLA LAVFIFLRLR NVLGQKTGNE RPPFDRAARD VVRGAQDNVV PLPGAVVDQA 
PQTPSADVVP PTDRWKGVAE PGTPLAQGLN AIVAQDSSFD PQHFLTGARG AYEMIVLAFA
NGDRRALKDL LSPEVYDSFE AVIREREKQE QKTETRFVSI DKAELVSAEA RDRAAQLTVR
FVSQMITVTR DKTGAIVDGN PDKVADITDV WTFARDVGSR DPNWKLVGTG SVH