Gene RPC_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0256 
Symbol 
ID3971127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp269394 
End bp270500 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID637923369 
Producthypothetical protein 
Protein accessionYP_530150 
Protein GI90421780 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.216525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTA ATCCGATGAA CATTCCTCCG ATCTCGATCG CCGGCGCCAA GGCGGCCTTA 
GTCGAGCAAT ACGGCGATCC CGTTCTGCGC CGCCGCGCCT CGATGCTGTG GGGCACCCGC
GGGGTCGGAA AGTCGTCGAT CGTGCGCCAG GTGGCGGAGC ATTTCGGCAT CCCGCTGGTC
GATCTGCGGC TGACCACGAT CGAACCGGTC GACATCCGCG GCGCAATCTA TGCCGACGAC
ACGCTCGCCA AGACGGTGTG GTTTCCGCCG GAATTCCTGC CCGCGCCGGA TCAGCACGAC
GGCATCCTGT TTCTTGACGA ATTGACCGCC GCCGACCAGC GGCTGCAGAT CTCGGCCTAT
TCGCTGATCC TCGACCGCCG CGTCGGCAAC TACCAACTGC CGGACGGCTG GCAGGTGGTC
GCCGCCGGCA ACGCCTCGTT CCACGGCGCG ATCAGCCACG ACATGGGCAC CGCGCTCGCC
GACCGCATGT TCCACTTCAA CGTGCAGACC GTGATCGACG CCTTCCTGGC CCACGCGCTG
GAGCGCAATT TCGCCCCCGA GGTGATGGCC TATCTGAAGA TCCGCCCGGA CAAGCTCGAC
GACACCCAGG CGCAGCTCGC CGGCGAGCAC CTGATCGGCG CGTCCCCACG CGGCTGGGAG
GATATTTCCA ACGTGCTGAA GTCGAGCCTG TCCGACGCCA CCAAGCGGAT CTTCGTGCAG
GGCCGCATCG GCGCCGCCAA CGCGGCGGAG TTCTTCGGCG TGTTGCGCGA GATCCAGGCC
GGCACCGACG TGATCCGGCT GTTGGCGGCG CGCCCCGGTC CGGAGACTGC GGCGCTGCTG
CCGAAGAGCC TCGACGGGCT GTACGGCATG ACCTACGGGC TGCTCGCCGC CTGCGTCGAC
GACCGCACGC TGGCCCGCGC GCTGGAAATC GTCGAGCAAC TGCCCGACAT CCGCGGCGTG
CCGCTGCCGA TCCGCGAGAT CCAGACCCTG GCAATGGAGC TGTTGATGCA GCGCGCGCTG
TCCAGCGGGC TCGAGGCCGC GATCCTGGAG AGCCCGTCCT ATCATCGCTA TGACGAGCAC
CGCCGCCGGG AAAGCCAGAA TGCCTGA
 
Protein sequence
MLSNPMNIPP ISIAGAKAAL VEQYGDPVLR RRASMLWGTR GVGKSSIVRQ VAEHFGIPLV 
DLRLTTIEPV DIRGAIYADD TLAKTVWFPP EFLPAPDQHD GILFLDELTA ADQRLQISAY
SLILDRRVGN YQLPDGWQVV AAGNASFHGA ISHDMGTALA DRMFHFNVQT VIDAFLAHAL
ERNFAPEVMA YLKIRPDKLD DTQAQLAGEH LIGASPRGWE DISNVLKSSL SDATKRIFVQ
GRIGAANAAE FFGVLREIQA GTDVIRLLAA RPGPETAALL PKSLDGLYGM TYGLLAACVD
DRTLARALEI VEQLPDIRGV PLPIREIQTL AMELLMQRAL SSGLEAAILE SPSYHRYDEH
RRRESQNA