| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0214 |
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| Symbol | |
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| ID | 3971163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 232473 |
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| End bp | 233735 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637923327 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_530108 |
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| Protein GI | 90421738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0176423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTCG AGGTCGTCAC CTTCGGCTGC CGGCTCAACG CCTTCGAATC CGAACTGATC
CGGCGCCAGG CGGAAGCCGC CGGCTGCACC GACACCATCG TGGTGAATTC CTGCGCGGTG
ACCAACGAGG CGGTGGCGCA GGCGCGGCAA TCGATCCGCC GGCTGAAGCG CGAACGGCCA
AGCGCGCGCA TCGTCGTCAC CGGCTGCGCC GCGCAGACCC AGGCGGCGAT GTTCGCCGAC
ATGGTCGAAG TCGATCGCGT GCTCGGCAAT GACGACAAGA TGCGCGGCAC CGCCTGGCGC
GCAGCGCAAA CCGCCTTCGC GGCGGGCCCT GTTCCGGGCG CGGAAAAGAT CGCGGTCGCC
GACATCATGG CGGTGCGCGA GATGGCGCCG CATCTTTTGG ACGGCTACCA GAGCGGGCTG
CCGCGGGTGT TCGTGCAGGT GCAAAACGGT TGCGACCATC GCTGCACCTT CTGCATCATC
CCGTTCGGCC GGGGCAATTC GCGCTCGGTG CCGCTGGCCG CGGCGGTCGA GCAGGTCCGC
GCGCTCACGG AGCGCGGCCA TGCCGAGATC GTGCTGACCG GGGTCGATCT GACCAGCTAC
GGCGCCGACC TCGCCGGCGC GCCGACGCTC GGGTTGCTCA CCAAGCAGAT CCTGCGCGAA
GTGCCGGAAC TGCAGCGGCT GCGGATCTCC TCGATCGATT CGATCGAGGC GGATGCCGAC
CTGCTGGACG TCGTGGCCAA TGAGCCGCGG CTGATGCCGC ATCTGCACCT GTCGCTGCAG
TCCGGCGACG ATCTGATCCT GAAGCGGATG AAGCGGCGGC ATTGCCGCGC CCAGGCGATC
GAATTCTGCG CGCAGCTGCG CCGGCTGCGG CCGGACATCG CGCTCGGCGC CGACCTGATC
GCCGGGTTTC CGACCGAGAC CGACGAGATG TTCGCCCGCT CGCTGGATCT GGTCGAGGCC
TGCGACCTCA GCTTGCTGCA CGTGTTTCCG TACTCGCCGC GGCCCGGCAC CGCGGCGGCG
AAGATGCCGC AAGTCGATGG CAATGCCGTC AAGCAGCGCG CCAAGCGGCT GCGCGAGGCC
GGCGACGCGG CGCTGCTGCG GCGGCTCGAT GCTGAGATCG GCGCGGCGCG CGAGGTTTTG
ATCGAAAGCC CGAGCCAGGG CCGCACCGAG CATTTTCTGC CCGTGGCGAT CGCCGGCGAC
ACCCCCGGCG CAGTGCGGCG GCTGACGATC ACGGGGCATG ACGGGGCAAG ATTGACGGTG
TGA
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| Protein sequence | MSVEVVTFGC RLNAFESELI RRQAEAAGCT DTIVVNSCAV TNEAVAQARQ SIRRLKRERP
SARIVVTGCA AQTQAAMFAD MVEVDRVLGN DDKMRGTAWR AAQTAFAAGP VPGAEKIAVA
DIMAVREMAP HLLDGYQSGL PRVFVQVQNG CDHRCTFCII PFGRGNSRSV PLAAAVEQVR
ALTERGHAEI VLTGVDLTSY GADLAGAPTL GLLTKQILRE VPELQRLRIS SIDSIEADAD
LLDVVANEPR LMPHLHLSLQ SGDDLILKRM KRRHCRAQAI EFCAQLRRLR PDIALGADLI
AGFPTETDEM FARSLDLVEA CDLSLLHVFP YSPRPGTAAA KMPQVDGNAV KQRAKRLREA
GDAALLRRLD AEIGAAREVL IESPSQGRTE HFLPVAIAGD TPGAVRRLTI TGHDGARLTV
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