Gene RPC_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0170 
Symbol 
ID3971197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp186446 
End bp186982 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637923283 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_530064 
Protein GI90421694 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA CGATTGACGT CGGTTCGGCG GTGTTGAGCG AGACGGCGCT GTATCGCCGC 
AACGTCGGCA TTGCGCTGTT CGACCCGCAA GGCCGGGTGC TGATCGGCCA TCGCTACCGG
GACGACGGTC CGGAAATCGT GCTGCCTGGC CTGGATTGGC AGATGCCGCA GGGGGGGATC
GACGCCGACG AGGAGCCGCG CGTCGCGGTC AAGCGCGAAT TGTGGGAGGA GACCGGCGTC
AGCCACGCCG ATTTCCTCGG CGAGACCGAT TGGCTGAGCT ACGACTTCCC GCCCTATCAC
GGCCCCAAGC ATCGGCTCGG GCATTTCCGC GGCCAGCGGC AGAAATGGTT CGCGCTGCGC
TTCACCGGCA GCGACGCCGA GATCGATCCG CTCGCCACCC GCAACGGCCA GCCGCCGGAA
TTCGACGCCT GGCGCTGGGA GCGGCTCGAT CGCGTCGCCG ATCTGGTGGT GCCGTTCCGC
CGCGAGGTCT ATCTGGCAGT GGCGCGGAGC TTTGCCCGGT TCACCGATCG GGTGTGA
 
Protein sequence
MSTTIDVGSA VLSETALYRR NVGIALFDPQ GRVLIGHRYR DDGPEIVLPG LDWQMPQGGI 
DADEEPRVAV KRELWEETGV SHADFLGETD WLSYDFPPYH GPKHRLGHFR GQRQKWFALR
FTGSDAEIDP LATRNGQPPE FDAWRWERLD RVADLVVPFR REVYLAVARS FARFTDRV