| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0166 |
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| Symbol | |
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| ID | 3971271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 181243 |
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| End bp | 182601 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923279 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_530060 |
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| Protein GI | 90421690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA AGACTTCGGT AATTCTGCTG AGCGTTGCCA CCGGCGCGGC GCTCACATTG
TTCGTGACCC AACCGCGATC GATCCTGATG GGATCCACCG CGCGGGCCGC GACCTCCGAC
ACCTATCGCC AGCTCAATCT GTTCGGCGAC GTGTTCGAAC GGGTGCGCAG CGACTATGTC
GAAAAGCCCG ACGACTCCAA GCTGGTGGAA TCCGCGATCA GCGGCATGCT GACCGGGCTC
GATCCGCATT CCAGCTACAT GGATGCCAAG AGCTTCCGCG ACATGCAGGT GCAGACCCGC
GGCGAGTTCG GCGGCCTCGG CATCGAGGTC ACCATGGAAG ACGGTCTGAT CAAGGTGGTG
TCGCCGATCG ACGATACCCC GGCCTCGAAG GCCGGCATTA TGGCCAACGA CATCATCACC
AATCTCGACG ACGAGGCGGT GCAGGGCCTG ACGCTCAATC AGGCGGTCGA GAAGATGCGC
GGCCCGGTCA ACACCAAGAT CCGGCTGAAG ATCGTCCGCA AGGGCCAGGA CAATCCGATC
GACGTCACTT TGGTGCGTGA CAACATCCGC GTCCGCTCGG TGCGCGCCCG CGTCGAAGGC
GACGACATCG GCTACATCCG CATCACCACC TTCAACGAGC AGACCACCGA AGGCTTGAAG
CGCGAACTCG CCGCCCTCAC CACCCAGATC GGCAACGACA AGCTGAAGGG CTGGATTCTC
GACCTGCGCA ACAACCCGGG CGGCCTCTTG GAAGAAGCCG TGACGGTGTC GGATGCGTTC
CTTGATCGCG GCGAAATCGT CTCCACCCGC GGCCGCAACG CCGAAGAAAC CCAGCGCCGC
GCCGCCCATG GGGGCGACCT CGCCAAGGGC AAGCAGGTCA TCGTGCTGAT CAATGGCGGC
TCGGCTTCGG CGTCGGAAAT CGTCGCCGGC GCGCTGCAGG ATCACAAGCG CGCCACGCTG
GTCGGCACCC GCTCGTTCGG CAAGGGCTCG GTGCAGACCA TCATTCCGCT CGGAAGCGGC
AACGGCGCGC TGCGGCTGAC CACGGCGCGC TACTTCACGC CGTCCGGCAA GTCGATCCAG
GCCAAGGGCA TCACCCCGGA CATCGAGGTG CTGCAGGACG TGCCCGACGA GATCAAGTCG
CGCACCGACA CCAAGGGCGA AGCCTCGCTG CGCGGCCATC TGAAGGCCGA AGGCGACGAG
AAGACCGGGT CGCAATCCTA CGTGCCGCCG GAAGCCAAGG ACGACAAGGC GTTGAAGATG
GCGGCCGACC TGCTGCACGG CGTCAAGGTC AACGCCACCG CGCCGGCCAC CGGCGACAAG
GCGGCGATCG ACAAGCCGGC CGGCAAGGTC GAGAACTGA
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| Protein sequence | MMRKTSVILL SVATGAALTL FVTQPRSILM GSTARAATSD TYRQLNLFGD VFERVRSDYV
EKPDDSKLVE SAISGMLTGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV
SPIDDTPASK AGIMANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IVRKGQDNPI
DVTLVRDNIR VRSVRARVEG DDIGYIRITT FNEQTTEGLK RELAALTTQI GNDKLKGWIL
DLRNNPGGLL EEAVTVSDAF LDRGEIVSTR GRNAEETQRR AAHGGDLAKG KQVIVLINGG
SASASEIVAG ALQDHKRATL VGTRSFGKGS VQTIIPLGSG NGALRLTTAR YFTPSGKSIQ
AKGITPDIEV LQDVPDEIKS RTDTKGEASL RGHLKAEGDE KTGSQSYVPP EAKDDKALKM
AADLLHGVKV NATAPATGDK AAIDKPAGKV EN
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