Gene RPC_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0131 
Symbol 
ID3971273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp145145 
End bp145867 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID637923243 
ProductNUDIX hydrolase 
Protein accessionYP_530025 
Protein GI90421655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAAG GTGCCCGTTT TGATCGCGCC ACGGATCTTA GAGTGGACGC CGCTGAGGTA 
GATGCGAATG CGGAGATGGA CAGTCGCGTG GCTCTTCATT GGGCGAGATC AGTGCGCGAA
AATCCACGGC TCTTTAATGG GCCATTGTTA TCGCCGGTTG GTGTATCCGT TCGGAACGGT
TGCGCCACAC TTCGCGTCAA GCGATCGGAC TACGCACACT ATTTGTATGC GAGATCTATC
GCGCACACGG ACGGCGCATC AACGCCGGGT ACGATTTTTG TCTCTTTAGT GGTGCCAATC
GGGCCGTCCA GGTTTATCGC CGGAAGAATG GCCGCGCACA CTGCGACGCC GGGCATTGTT
CAATTGCCTG GCGGCGGTGT AAGCGACTTA GGCGATCCGC GGCTGACAGC GGTAGAGGAG
GCGTCTGAGG AGCTCGGTCT GGAGTTGCAT GTAGAGCGAT TGCGTATGCT CGGCGTTATC
GTTCGCGACG CACCTCTCGA TGTCGGTGTT GTTTATCTGG CACCTCGTCA GAATCCGGCC
GCGCTGCGGG CGACGTTCGA AAACCTGCTG GAGTCCGATC GCAGAGCTCA GAGAGAGAGC
GAGTTTCAAG AGCTGTTGGA GTTTGATGTC GGAACGCTTG ATCGGCAGCA TCCAGGAGAG
CGGCTTGTGG ACTATCTAGG GGCGGTCGCG GGGGGCTTAA GCAGGGATCG GTGGCATGAC
TGA
 
Protein sequence
MGQGARFDRA TDLRVDAAEV DANAEMDSRV ALHWARSVRE NPRLFNGPLL SPVGVSVRNG 
CATLRVKRSD YAHYLYARSI AHTDGASTPG TIFVSLVVPI GPSRFIAGRM AAHTATPGIV
QLPGGGVSDL GDPRLTAVEE ASEELGLELH VERLRMLGVI VRDAPLDVGV VYLAPRQNPA
ALRATFENLL ESDRRAQRES EFQELLEFDV GTLDRQHPGE RLVDYLGAVA GGLSRDRWHD