| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4685 |
|---|
| Symbol | |
|---|
| ID | 3912503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5299921 |
|---|
| End bp | 5301207 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886590 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_488279 |
|---|
| Protein GI | 86751783 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGGGC ATTCCACGCC GAAGGGCGCC TGGAGGATCA CCTTCCTCCT GTTCCTGTTC
ATGGTGGTCA ACTTCGCCGA CAAGATCGTC GTCGGCCTCG CCGGCGTGCC GATCACCCAA
GAGCTCGGTC TCACACCCGA ACAGTTCGGC CTGCTCGGCT CGTCGTTTTT CTTCCTGTTC
TCGATCACGG CGGTCGTCGT CGGCTTCGTC GTCAACCGGG TCGACACCCG TTGGGTGCTG
TTGGTGCTGG CCCTGATCTG GGCGGTGGCG CAGTTTCCGA TGGTCGGCAC CGTCAGCTTC
ACCACGCTCT TGATCTGCCG CATCATCCTC GGCGCCGGCG AAGGCCCGGC CTTCGCGGTC
GCGGCGCATG CGATCTACAA ATGGTTTCCC GACCACAAGC GGACGCTGCC CACCGCGATC
CTGTCGCAGG GCTCGGCGTT CGGCGTGATC CTGGCGGTAC CGGCGCTGAA CTGGATCATC
GTCAACCATT CCTGGCACTA CGCGTTCGGC GCGCTCGGCA TTGTCGGGCT GATGTGGGCG
GCGGCGTGGC TCGCGCTCGG CAAGGAAGGC CCGCTGGTGC CGACCGCGGC GATGGCGGCG
GCGGAGACTC GGATCCCCTA TGCGCGGCTG CTGACCTCGC GCACCTTCAT CGGCTGCGTC
GCGGCGACGT TCGGTGCGTA TTGGGCGCTG TCGCTGGGAC TGACCTGGTT CACCACCTAC
ATCATCAGCG GGCTCGGCTT CAGCCAGCAC CAGGCCGGCC TGATCTCGAT CACGCCCTGG
GTGTTCGGCG CCGCCGTCGT GATGCTGACC GGCTGGCTGT CGCAGTTGCT GATGGGGCGC
GGCGCGTCGA GCCGGCTGGC CCGCGGCGTG CTCGGCGCGG CCCCGCTGGT GCTCGGCGGA
CTGATCCTGC TGACGATGCC GTTGATCGAC AATCCGACCG GGCGGATCGC CGCGCTGGTG
ATCGGCTCGG GGTTGTGCGG ATCGATCTAC GTGGTGTGCC CGCCGATGAT CGCCGAGTTC
GCCCCGGTGT CGCAGCGCGG CGCCGCGATC GCGATCTACG GTGCGCTGTA CACGCTCGCC
GGCATCGTGG CGCCGCTGGT GATGGGCAGC GTCGTCCAGC ACGCCGCGTC GCTGAACGAG
GGCTATCTCA CCGGCTACGT GATCAACGGC GCGGTGATGA TCGTCTCCGG CCTGCTCGGC
CTGCTGCTGC TGTGGCCGAA CACCGAGCGC GCGAGGCTGC TGAGCAGCTC GGACGTCGCG
CCTGTCGGCC TTCGCAAGCC GGCGTGA
|
|---|
| Protein sequence | MDGHSTPKGA WRITFLLFLF MVVNFADKIV VGLAGVPITQ ELGLTPEQFG LLGSSFFFLF
SITAVVVGFV VNRVDTRWVL LVLALIWAVA QFPMVGTVSF TTLLICRIIL GAGEGPAFAV
AAHAIYKWFP DHKRTLPTAI LSQGSAFGVI LAVPALNWII VNHSWHYAFG ALGIVGLMWA
AAWLALGKEG PLVPTAAMAA AETRIPYARL LTSRTFIGCV AATFGAYWAL SLGLTWFTTY
IISGLGFSQH QAGLISITPW VFGAAVVMLT GWLSQLLMGR GASSRLARGV LGAAPLVLGG
LILLTMPLID NPTGRIAALV IGSGLCGSIY VVCPPMIAEF APVSQRGAAI AIYGALYTLA
GIVAPLVMGS VVQHAASLNE GYLTGYVING AVMIVSGLLG LLLLWPNTER ARLLSSSDVA
PVGLRKPA
|
|---|
| |